RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 COL8A2P25067 703 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 GPR6P46095 362 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-204ENST00000462475 GALK2Q01415 458 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 NPTX1Q15818 432 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 AGKQ53H12 422 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 WDR88Q6ZMY6 472 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 SNX32Q86XE0 403 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 PTOV1Q86YD1 416 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 SKA3Q8IX90 412 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 BHLHE22Q8NFJ8 381 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-204ENST00000462475 YIPF5Q969M3 257 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 MCHR1Q99705 422 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 ARHGDIGQ99819 225 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 CCDC28BQ9BUN5 200 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 MS4A5Q9H3V2 200 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 DENND2DQ9H6A0 471 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-204ENST00000462475 CORO2BQ9UQ03 480 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 ANGPT4Q9Y264 503 aa13.82□□□□□ -0.2
COL7A1-204ENST00000462475 EVPLLA8MZ36 301 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 B4DSR2 109 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 WNT9BO14905 357 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 CHP2O43745 196 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 MT-ATP6P00846 226 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 THY1P04216 161 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 SAGP10523 405 aaPredicted RBP13.81□□□□□ -0.2
COL7A1-204ENST00000462475 NAT2P11245 290 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 PCBP3P57721 371 aaKnown RBP13.81□□□□□ -0.2
COL7A1-204ENST00000462475 RPS23P62266 143 aaKnown RBP13.81□□□□□ -0.2
COL7A1-204ENST00000462475 MELKQ14680 651 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 DUSP7Q16829 419 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 ZNF613Q6PF04 617 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 DLEU7Q6UYE1 221 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 LINC00114Q6XXX2 140 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 GPR32P1Q8NGA4 272 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 RDH5Q92781 318 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 TMEM54Q969K7 222 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 RACGAP1Q9H0H5 632 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 LPAR2Q9HBW0 351 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 GLTPQ9NZD2 209 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 SLC7A8Q9UHI5 535 aa13.81□□□□□ -0.2
COL7A1-204ENST00000462475 A0A1W2PPW3 197 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 CPSF4LA6NMK7 179 aaKnown RBP13.8□□□□□ -0.2
COL7A1-204ENST00000462475 FAM157AC9JC47 383 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 FMO6PO60774 539 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 LYPD3O95274 346 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 CH25HO95992 272 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 SERPINA5P05154 406 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 ACHEP22303 614 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 SELPLGQ14242 412 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 ZNF74Q16587 644 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 ALKBH6Q3KRA9 238 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 UGT2A3Q6UWM9 527 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 SLC35D2Q76EJ3 337 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 PIWIL3Q7Z3Z3 882 aaKnown RBP13.8□□□□□ -0.2
COL7A1-204ENST00000462475 GLCCI1Q86VQ1 547 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 TSPYL5Q86VY4 417 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-204ENST00000462475 MEX3DQ86XN8 651 aaKnown RBP13.8□□□□□ -0.2
COL7A1-204ENST00000462475 RBM45Q8IUH3 476 aaKnown RBP13.8□□□□□ -0.2
COL7A1-204ENST00000462475 SLC22A24Q8N4F4 322 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 PAQR4Q8N4S7 273 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-204ENST00000462475 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-204ENST00000462475 OR4D11Q8NGI4 311 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 OR6T1Q8NGN1 323 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 OR6X1Q8NH79 312 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 SH3GL3Q99963 347 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 EVA1AQ9H8M9 152 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 ZNF275Q9NSD4 429 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-204ENST00000462475 TMEM38BQ9NVV0 291 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 TAS2R5Q9NYW4 299 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 DUSP13Q9UII6 198 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 FBXL3Q9UKT7 428 aa13.8□□□□□ -0.2
COL7A1-204ENST00000462475 KPNA4O00629 521 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-204ENST00000462475 RP2O75695 350 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 OR6A2O95222 327 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 CCL2P13500 99 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 PCMT1P22061 227 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 LSP1P33241 339 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 ATP4BP51164 291 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 MTPNP58546 118 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 ENTPD8Q5MY95 495 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 BEND6Q5SZJ8 279 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-204ENST00000462475 DHDDSQ86SQ9 333 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 C11orf65Q8NCR3 313 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 VANGL1Q8TAA9 524 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-204ENST00000462475 LRRC8CQ8TDW0 803 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 TMEM186Q96B77 213 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 OR51B6Q9H340 312 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 METTL17Q9H7H0 456 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-204ENST00000462475 HIF1ANQ9NWT6 349 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 TREM2Q9NZC2 230 aa13.79□□□□□ -0.2
COL7A1-204ENST00000462475 TENM1Q9UKZ4 2725 aa13.78□□□□□ -0.2
COL7A1-204ENST00000462475 M0QX08 132 aa13.78□□□□□ -0.2
COL7A1-204ENST00000462475 PPIHO43447 177 aaKnown RBP13.78□□□□□ -0.2
COL7A1-204ENST00000462475 ERLIN1O75477 346 aa13.78□□□□□ -0.2
COL7A1-204ENST00000462475 VENTXO95231 258 aa13.78□□□□□ -0.2
COL7A1-204ENST00000462475 CLPTM1O96005 669 aa13.78□□□□□ -0.2
COL7A1-204ENST00000462475 TFP02787 698 aa13.78□□□□□ -0.2
COL7A1-204ENST00000462475 MSMBP08118 114 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms