RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 A0A0B4J203 849 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 G3V3Q6 166 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 GABARAPH6UMI1 98 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 AIPO00170 330 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 PIN1P1O15428 100 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 PPM1BO75688 479 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ONECUT2O95948 504 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 IGF2P01344 180 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 UQCRC1P31930 480 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 PPICP45877 212 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 CCR6P51684 374 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 DCDP81605 110 aaKnown RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 CRYZQ08257 329 aaKnown RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 DBPQ10586 325 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 TRA2AQ13595 282 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 FGFBP1Q14512 234 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 EBPQ15125 230 aaKnown RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 PON3Q15166 354 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 LGALSLQ3ZCW2 172 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF684Q5T5D7 378 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 LCN10Q6JVE6 187 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 RFPL4BQ6ZWI9 263 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 TIGD4Q8IY51 512 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 CMTM4Q8IZR5 234 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 NPEPL1Q8NDH3 523 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 C7orf57Q8NEG2 295 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 OR4C3Q8NH37 302 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 SUN5Q8TC36 379 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 SMAP2Q8WU79 429 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 DAZLQ92904 295 aaKnown RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ADIPOR1Q96A54 375 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 SGTBQ96EQ0 304 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 ZFP3Q96NJ6 502 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 GFI1Q99684 422 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 UTP23Q9BRU9 249 aaKnown RBP11.29□□□□□ -0.6
COL4A6-204ENST00000461897 C20orf85Q9H1P6 137 aa11.29□□□□□ -0.6
COL4A6-204ENST00000461897 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 A0A1B0GUH1 482 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 RPS10-NUDT3A0A1W2PQS6 291 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 FRG2CA6NGY1 282 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 IFITM5A6NNB3 132 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 IDSB3KWA1 339 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 SNAPC5O75971 98 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 SRMP19623 302 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 DPP4P27487 766 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 GPR143P51810 404 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 AP3S2P59780 193 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 ZP1P60852 638 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
COL4A6-204ENST00000461897 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
COL4A6-204ENST00000461897 DHODHQ02127 395 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 IL11RAQ14626 422 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 CLLU1Q5K131 121 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 AGBL5Q8NDL9 886 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 SDR9C7Q8NEX9 313 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 OR1N1Q8NGS0 311 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 OR4K13Q8NH42 304 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 RHBDD1Q8TEB9 315 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-204ENST00000461897 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 OR14A2Q96R54 314 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 GAL3ST4Q96RP7 486 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 CCNL2Q96S94 520 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-204ENST00000461897 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-204ENST00000461897 GLTPQ9NZD2 209 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 AK6Q9Y3D8 172 aaKnown RBP11.28□□□□□ -0.6
COL4A6-204ENST00000461897 KIF26BQ2KJY2 2108 aa11.28□□□□□ -0.6
COL4A6-204ENST00000461897 A0A087WUJ7 227 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 IGHV3-20A0A0C4DH32 117 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 TUBAL3A6NHL2 446 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 VSTM2BA6NLU5 285 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 MCIDASD6RGH6 385 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.6
COL4A6-204ENST00000461897 GALR2O43603 387 aaPredicted RBP11.27□□□□□ -0.6
COL4A6-204ENST00000461897 IFNA7P01567 189 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 MT-ND4P03905 459 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 CCL4P13236 92 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF28P17035 718 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.6
COL4A6-204ENST00000461897 DNASE1P24855 282 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 EDNRAP25101 427 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 MECP2P51608 486 aaKnown RBP11.27□□□□□ -0.6
COL4A6-204ENST00000461897 HCCSP53701 268 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 PSMD4P55036 377 aaKnown RBP11.27□□□□□ -0.6
COL4A6-204ENST00000461897 TOR2AQ5JU69 321 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 KIRREL2Q6UWL6 708 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 IDO2Q6ZQW0 420 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 DNM1P46Q6ZS02 220 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 SYT9Q86SS6 491 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 BPHLQ86WA6 291 aaPredicted RBP11.27□□□□□ -0.6
COL4A6-204ENST00000461897 OR11G2Q8NGC1 345 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF671Q8TAW3 534 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 SNX33Q8WV41 574 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 PMEPA1Q969W9 287 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 NXPE2Q96DL1 559 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 SLC19A3Q9BZV2 496 aa11.27□□□□□ -0.6
COL4A6-204ENST00000461897 ZNF436Q9C0F3 470 aaPredicted RBP11.27□□□□□ -0.6
COL4A6-204ENST00000461897 NRSN2Q9GZP1 204 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms