RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 GRIP2Q9C0E4 1043 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 NELFAQ9H3P2 528 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 INIPQ9NRY2 104 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 ENPP4Q9Y6X5 453 aa13.42□□□□□ -0.26
VARS-219ENST00000461328 ZNF469Q96JG9 3925 aaPredicted RBP13.42□□□□□ -0.26
VARS-219ENST00000461328 IGHV1-18A0A0C4DH31 117 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 CD8AP01732 235 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 IGHG1P01857 330 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 CD79AP11912 226 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 HOXB1P14653 301 aaPredicted RBP13.41□□□□□ -0.26
VARS-219ENST00000461328 B4GALT1P15291 398 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 TTKP33981 857 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 DAP3P51398 398 aaKnown RBP13.41□□□□□ -0.26
VARS-219ENST00000461328 IDH3GP51553 393 aaPredicted RBP13.41□□□□□ -0.26
VARS-219ENST00000461328 TNK1Q13470 666 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 TOP3AQ13472 1001 aaPredicted RBP13.41□□□□□ -0.26
VARS-219ENST00000461328 FGD3Q5JSP0 725 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 RRM2BQ7LG56 351 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 WDFY1Q8IWB7 410 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 NRMQ8IXM6 262 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 NANOS1Q8WY41 292 aaKnown RBP13.41□□□□□ -0.26
VARS-219ENST00000461328 SLC25A44Q96H78 314 aaPredicted RBP13.41□□□□□ -0.26
VARS-219ENST00000461328 POM121Q96HA1 1249 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 FOXB1Q99853 325 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 CBLN4Q9NTU7 201 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 GLTPQ9NZD2 209 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 MOKQ9UQ07 419 aa13.41□□□□□ -0.26
VARS-219ENST00000461328 HTR3EA5X5Y0 456 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 hCG_2039718K7EN88 272 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 FFAR1O14842 300 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 IGHV4-39P01824 125 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 CRYAAP02489 173 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 HSD17B1P14061 328 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 HOXB4P17483 251 aaPredicted RBP13.4□□□□□ -0.26
VARS-219ENST00000461328 MSX2P35548 267 aaPredicted RBP13.4□□□□□ -0.26
VARS-219ENST00000461328 KRT72Q14CN4 511 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 ZNF544Q6NX49 715 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 NHLRC1Q6VVB1 395 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 MDP1Q86V88 176 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 MEX3DQ86XN8 651 aaKnown RBP13.4□□□□□ -0.26
VARS-219ENST00000461328 CCDC36Q8IYA8 594 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 CDK20Q8IZL9 346 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 MUC15Q8N387 334 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 FITM2Q8N6M3 262 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 MOSPD2Q8NHP6 518 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 ACOT11Q8WXI4 607 aaPredicted RBP13.4□□□□□ -0.26
VARS-219ENST00000461328 TMEM54Q969K7 222 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 NSMCE2Q96MF7 247 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 KATNB1Q9BVA0 655 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 CACNG6Q9BXT2 260 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 BARX1Q9HBU1 254 aaPredicted RBP13.4□□□□□ -0.26
VARS-219ENST00000461328 MAN2C1Q9NTJ4 1040 aa13.4□□□□□ -0.26
VARS-219ENST00000461328 DCAF13Q9NV06 445 aaKnown RBP13.4□□□□□ -0.26
VARS-219ENST00000461328 STX18Q9P2W9 335 aaKnown RBP13.4□□□□□ -0.26
VARS-219ENST00000461328 GDF2Q9UK05 429 aaPredicted RBP13.4□□□□□ -0.26
VARS-219ENST00000461328 EFCAB9A8MZ26 197 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 ARPC2O15144 300 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 NDUFS7O75251 213 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 ENTPD5O75356 428 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 H1F0P07305 194 aaKnown RBP13.39□□□□□ -0.27
VARS-219ENST00000461328 CECR9P0C854 216 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 FUT4P22083 530 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 ACVR1BP36896 505 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 GPR4P46093 362 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 LSM11P83369 360 aaKnown RBP eCLIP13.39□□□□□ -0.27
VARS-219ENST00000461328 ALG10Q5BKT4 473 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 FAM86B1Q8N7N1 296 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 NOXO1Q8NFA2 376 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 MCUR1Q96AQ8 359 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 NDEL1Q9GZM8 345 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 GORASP2Q9H8Y8 452 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 NMNAT1Q9HAN9 279 aaPredicted RBP13.39□□□□□ -0.27
VARS-219ENST00000461328 NIPBLQ6KC79 2804 aaeCLIP13.39□□□□□ -0.27
VARS-219ENST00000461328 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
VARS-219ENST00000461328 TRAV27A0A087WT01 109 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 B2RBV5 119 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 PRSS23O95084 383 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 RAB36O95755 333 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 HLA-HP01893 362 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 CELA3BP08861 270 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 QDPRP09417 244 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 PGA4P0DJD7 388 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 PGA3P0DJD8 388 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 CBR1P16152 277 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 ITGA2P17301 1181 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 RHCEP18577 417 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 MAKP20794 623 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 ARR3P36575 388 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 NUDT6P53370 316 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 MYBPC1Q00872 1141 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 NAAAQ02083 359 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 CD47Q08722 323 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 LAPTM4AQ15012 233 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 GSG1Q2KHT4 349 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 C3orf36Q3SXR2 165 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 C11orf71Q6IPW1 123 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 VHLLQ6RSH7 139 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 TBPL2Q6SJ96 375 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 MBOAT2Q6ZWT7 520 aa13.38□□□□□ -0.27
VARS-219ENST00000461328 OAFQ86UD1 273 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms