RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CAMK2DQ13557 499 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 FLOT2Q14254 428 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 LAPTM4AQ15012 233 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 GABRA6Q16445 453 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 KRTAP21-3Q3LHN1 58 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 IQCCQ4KMZ1 466 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 C9orf135Q5VTT2 229 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 KLHL17Q6TDP4 642 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 KLHL24Q6TFL4 600 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 C20orf196Q8IYI0 205 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 C17orf78Q8N4C9 275 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 LINC00471Q8N535 108 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR6N1Q8NGY5 312 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 GTPBP3Q969Y2 492 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SLC25A44Q96H78 314 aaPredicted RBP11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 RADILQ96JH8 1075 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CADM1Q9BY67 442 aaKnown RBP11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 LAMP3Q9UQV4 416 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 HIF3AQ9Y2N7 669 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 DSCAMO60469 2012 aa11.62□□□□□ -0.55
RAB11FIP3-207ENST00000461009 TRBV4-1A0A0J9YWV2 114 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SH3PXD2BA1X283 911 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 NPIPB13A6NJU9 1138 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 NPIPB4C9JG80 1138 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 M0R3G1 203 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 WNT11O96014 354 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 PLAUP00749 431 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 F13BP05160 661 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 PAX1P15863 534 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CDH2P19022 906 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 FUT4P22083 530 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MAGEA2P43356 314 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CSNK1A1P48729 337 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 HMGA2P52926 109 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CBX1P83916 185 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ZBED5Q49AG3 693 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ALG10Q5BKT4 473 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CARD17Q5XLA6 110 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 KRTAP1-3Q8IUG1 177 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 TMEM123Q8N131 208 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 DEPDC4Q8N2C3 294 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR4K5Q8NGD3 323 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR51A7Q8NH64 312 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ZNF566Q969W8 418 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 BOD1Q96IK1 185 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 TNFRSF13CQ96RJ3 184 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 HEATR1Q9H583 2144 aaKnown RBP11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 YY1AP1Q9H869 796 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MGAT4BQ9UQ53 548 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 POMPQ9Y244 141 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 AMDHD2Q9Y303 409 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 PRR14LQ5THK1 2151 aa11.61□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CENPBD1B2RD01 187 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 H7C1Q1 480 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 TNFRSF11BO00300 401 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR10H3O60404 316 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ENTPD5O75356 428 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 IGHG1P01857 330 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 RPL4P36578 427 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 GPR4P46093 362 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OMPP47874 163 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 FOXG1P55316 489 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CLRN1P58418 232 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CTXN1P60606 82 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 LSM11P83369 360 aaKnown RBP eCLIP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 BSPH1Q075Z2 132 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 LGALS3BPQ08380 585 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 GK3PQ14409 553 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ETFDHQ16134 617 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CEACAM16Q2WEN9 425 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ZNF672Q499Z4 452 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR2T5Q6IEZ7 315 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ANKRD16Q6P6B7 361 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 TMEM108Q6UXF1 575 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SPATA24Q86W54 205 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CCDC36Q8IYA8 594 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR1K1Q8NGR3 316 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OR2T29Q8NH02 315 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MOSPD2Q8NHP6 518 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SMAP2Q8WU79 429 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 POM121Q96HA1 1249 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 FAM46AQ96IP4 442 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ALKBH3Q96Q83 286 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 FUZQ9BT04 418 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ULBP2Q9BZM5 246 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 TXNIPQ9H3M7 391 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 CRLF2Q9HC73 371 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MOV10Q9HCE1 1003 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 OBP2BQ9NPH6 170 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 SLC17A5Q9NRA2 495 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 ZNF701Q9NV72 531 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 GLTPQ9NZD2 209 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 POFUT2Q9Y2G5 429 aa11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MAGED1Q9Y5V3 778 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 MAP1AP78559 2803 aaPredicted RBP11.6□□□□□ -0.55
RAB11FIP3-207ENST00000461009 TRAV27A0A087WT01 109 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 DHRS12A0PJE2 317 aa11.59□□□□□ -0.55
RAB11FIP3-207ENST00000461009 UNC119BA6NIH7 251 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms