RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 B2MP61769 119 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 MVKQ03426 396 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 ZNF404Q494X3 552 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 IFI44LQ53G44 452 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 ENTPD8Q5MY95 495 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 C1orf140Q5VVS0 124 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 ABLIM2Q6H8Q1 611 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 GLYATQ6IB77 296 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 FIP1L1Q6UN15 594 aaKnown RBP9.89□□□□□ -0.83
APTX-209ENST00000460940 PLXDC2Q6UX71 529 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 GDPD3Q7L5L3 318 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 ZNF555Q8NEP9 628 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 FBLIM1Q8WUP2 373 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 LRRC46Q96FV0 321 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 EPYCQ99645 322 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 TMEM43Q9BTV4 400 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 CHST11Q9NPF2 352 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 KLHL9Q9P2J3 617 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 EGFL7Q9UHF1 273 aa9.89□□□□□ -0.83
APTX-209ENST00000460940 KIAA1549Q9HCM3 1950 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 HMX3A6NHT5 357 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 LIPT2A6NK58 231 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 CPSF4LA6NMK7 179 aaKnown RBP9.88□□□□□ -0.83
APTX-209ENST00000460940 hCG_2039718K7EN88 272 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 SMAD9O15198 467 aaKnown RBP9.88□□□□□ -0.83
APTX-209ENST00000460940 OR2T1O43869 369 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 CYTIPO60759 359 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 FZD7O75084 574 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 PRKD3O94806 890 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 OR5F1O95221 314 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 IFNW1P05000 195 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 ETV6P41212 452 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 CDH12P55289 794 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 CTBP2P56545 445 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 FOXF2Q12947 444 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 CDSNQ15517 529 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 FBXL19-AS1Q494R0 122 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 ESCO2Q56NI9 601 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 FAM214BQ7L5A3 538 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 RBM45Q8IUH3 476 aaKnown RBP9.88□□□□□ -0.83
APTX-209ENST00000460940 CNEP1R1Q8N9A8 125 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 RELL2Q8NC24 303 aaPredicted RBP9.88□□□□□ -0.83
APTX-209ENST00000460940 OR6K3Q8NGY3 331 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 OR6S1Q8NH40 331 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 PIGXQ8TBF5 258 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 SETD6Q8TBK2 473 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 ROBO4Q8WZ75 1007 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 SGCDQ92629 289 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 HSH2DQ96JZ2 352 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 NAA11Q9BSU3 229 aaPredicted RBP9.88□□□□□ -0.83
APTX-209ENST00000460940 PRR14Q9BWN1 585 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 TAPBPLQ9BX59 468 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 DCAF13Q9NV06 445 aaKnown RBP9.88□□□□□ -0.83
APTX-209ENST00000460940 FAM118AQ9NWS6 357 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 KLHL13Q9P2N7 655 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 FOXD3Q9UJU5 478 aaPredicted RBP9.88□□□□□ -0.83
APTX-209ENST00000460940 CACNA1CQ13936 2221 aa9.88□□□□□ -0.83
APTX-209ENST00000460940 TRAV36DV7A0A075B6V5 113 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 A0A0G2JMP0 313 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 A1L4Q6 167 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 C12orf71A8MTZ7 269 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 PRSS44E7EML9 344 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 RPS5P46782 204 aaKnown RBP9.87□□□□□ -0.83
APTX-209ENST00000460940 TAS2R41P59536 307 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 EMX1Q04741 257 aaPredicted RBP9.87□□□□□ -0.83
APTX-209ENST00000460940 MFSD13AQ14CX5 517 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 TBPL2Q6SJ96 375 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 PAQR6Q6TCH4 344 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 DEF8Q6ZN54 512 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 ZNF767PQ75MW2 155 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 KCTD20Q7Z5Y7 419 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 VTCN1Q7Z7D3 282 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 NOXA1Q86UR1 476 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 CELF2-AS1Q8N7Q2 184 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 OR5H6Q8NGV6 325 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 MFSD8Q8NHS3 518 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 ABHD3Q8WU67 409 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 POP5Q969H6 163 aaKnown RBP9.87□□□□□ -0.83
APTX-209ENST00000460940 PRRC1Q96M27 445 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 NSMCE2Q96MF7 247 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 TRAF4Q9BUZ4 470 aaPredicted RBP9.87□□□□□ -0.83
APTX-209ENST00000460940 SLC19A3Q9BZV2 496 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 LIN7BQ9HAP6 207 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 BCO1Q9HAY6 547 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 CCDC59Q9P031 241 aaKnown RBP9.87□□□□□ -0.83
APTX-209ENST00000460940 JKAMPQ9P055 326 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 EMC3Q9P0I2 261 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 PLEKHB1Q9UF11 243 aaPredicted RBP9.87□□□□□ -0.83
APTX-209ENST00000460940 ANKHD1Q8IWZ3 2542 aaKnown RBP9.87□□□□□ -0.83
APTX-209ENST00000460940 IGKV1D-42A0A075B6H8 117 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 IGKV3D-15A0A087WSY6 115 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 ZNF724A8MTY0 619 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 EEF1E1-BLOC1S5C9J1V9 151 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 LOC110117498-PIK3R3F6TDL0 507 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 CTDSP2O14595 271 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 MSTNO14793 375 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 EEF1E1O43324 174 aaKnown RBP9.87□□□□□ -0.83
APTX-209ENST00000460940 CD8BP10966 210 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 ITGA2P17301 1181 aa9.87□□□□□ -0.83
APTX-209ENST00000460940 TNFRSF1BP20333 461 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms