RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 UBQLNLQ8IYU4 475 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 DSELQ8IZU8 1212 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 EID3Q8N140 333 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 CYP4Z2PQ8N1L4 340 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC43A2Q8N370 569 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 EIF4E3Q8N5X7 224 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 PNLDC1Q8NA58 520 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 OR13F1Q8NGS4 319 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 OR2T11Q8NH01 316 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 WDR20Q8TBZ3 569 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 KCNE4Q8WWG9 221 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 GTF2H4Q92759 462 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RPL3LQ92901 407 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SNAPC3Q92966 411 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 TSLPQ969D9 159 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RPL36ALQ969Q0 106 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RERGQ96A58 199 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RFT1Q96AA3 541 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 C8orf44Q96CB5 159 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 MS4A6EQ96DS6 147 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 L3HYPDHQ96EM0 354 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 WDR34Q96EX3 536 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 CNBD2Q96M20 576 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 C3orf30Q96M34 536 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 AIF1LQ9BQI0 150 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SRSF8Q9BRL6 282 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 DCUN1D5Q9BTE7 237 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 TBCDQ9BTW9 1192 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 DDA1Q9BW61 102 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 EBPLQ9BY08 206 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 MS4A8Q9BY19 250 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 PCBD2Q9H0N5 130 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 TUBB1Q9H4B7 451 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 LIN28AQ9H9Z2 209 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RANGRFQ9HD47 186 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 SLCO1B3Q9NPD5 702 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 THSD1Q9NS62 852 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 PLCXD1Q9NUJ7 323 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 C5AR2Q9P296 337 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 TRPC4Q9UBN4 977 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 HEY2Q9UBP5 337 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 MARCOQ9UEW3 520 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 NDRG3Q9UGV2 375 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 ZDHHC2Q9UIJ5 367 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 RIMS3Q9UJD0 308 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 KLHL21Q9UJP4 597 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 FBXW2Q9UKT8 454 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 LIPT1Q9Y234 373 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 NAALAD2Q9Y3Q0 740 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 HSPE1-MOB4S4R3N1 261 aa4.35□□□□□ -1.71
ATPAF1-203ENST00000460928 YLPM1P49750 1951 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SPTBN1Q01082 2364 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 A0A0X1KG70 313 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ATP6AP2A0A1C7CYW4 349 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 RAB19A4D1S5 217 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ANKDD1BA6NHY2 528 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 MPTX1A8MV57 137 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF879B4DU55 563 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 C9JVG2 144 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 PLPP1O14494 284 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 PRKNO60260 465 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SRPX2O60687 465 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ATP6AP2O75787 350 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 UGT2B17O75795 530 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 KLF7O75840 302 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 NKX2-2O95096 273 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 IFNA10P01566 189 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 UMODP07911 640 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SERPINA6P08185 405 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 LINC00032P0C843 101 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SMIM10L1P0DMW3 83 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 PRPS2P11908 318 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 FCGR1AP12314 374 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 COX4I1P13073 169 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 CD1EP15812 388 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 IL7RP16871 459 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 TCN1P20061 433 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 EFNA1P20827 205 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 MYF6P23409 242 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 RYKP34925 604 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 OPRL1P41146 370 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 CAMPP49913 170 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 GPR143P51810 404 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 UGT2B15P54855 530 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 MFAP4P55083 255 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 TAS2R60P59551 318 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 DNAJB13P59910 316 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 DCDP81605 110 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF45Q02386 682 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 PMPCAQ10713 525 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 LCP2Q13094 533 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 PON3Q15166 354 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SSX2Q16385 188 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 TMEM44Q2T9K0 475 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 UGT3A2Q3SY77 523 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 FGD3Q5JSP0 725 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 CLLU1Q5K131 121 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 MANEAQ5SRI9 462 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 DNLZQ5SXM8 178 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 FRG2Q64ET8 278 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms