RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 ZNF566Q969W8 418 aa18.05■□□□□ 0.48
RPUSD3-210ENST00000460909 TMEM204Q9BSN7 226 aa18.05■□□□□ 0.48
RPUSD3-210ENST00000460909 CHID1Q9BWS9 393 aa18.05■□□□□ 0.48
RPUSD3-210ENST00000460909 LIME1Q9H400 295 aa18.05■□□□□ 0.48
RPUSD3-210ENST00000460909 NGBQ9NPG2 151 aa18.05■□□□□ 0.48
RPUSD3-210ENST00000460909 GLTPQ9NZD2 209 aa18.05■□□□□ 0.48
RPUSD3-210ENST00000460909 DPRXA6NFQ7 191 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 ZNF99A8MXY4 864 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 MCIDASD6RGH6 385 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 ACADSP16219 412 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 NR1H2P55055 460 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 CTXN1P60606 82 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 TAF11Q15544 211 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 OR2T5Q6IEZ7 315 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 C1orf94Q6P1W5 598 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 ASRGL1Q7L266 308 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 ZNF627Q7L945 461 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 OR2T29Q8NH02 315 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 ULBP2Q9BZM5 246 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 B3GAT2Q9NPZ5 323 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 TMCC3Q9ULS5 477 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 AMDHD2Q9Y303 409 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 CADP27708 2225 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 ROS1P08922 2347 aa18.04■□□□□ 0.48
RPUSD3-210ENST00000460909 A0A096LPE4 126 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 A0A1W2PPZ6 126 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 CENPBD1B2RD01 187 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 TNFRSF11BO00300 401 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 OR10H3O60404 316 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 TRMUO75648 421 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 IGHG1P01857 330 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 RPL27P61353 136 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 ZNF770Q6IQ21 691 aaPredicted RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 SPATA24Q86W54 205 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 ZNF519Q8TB69 540 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 HDAC2Q92769 488 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 NMD3Q96D46 503 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 RSRC1Q96IZ7 334 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 TSPAN32Q96QS1 320 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 KCNK17Q96T54 332 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 KRCC1Q9NPI7 259 aaPredicted RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 ZNF346Q9UL40 294 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 AURKCQ9UQB9 309 aa18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 RAI1Q7Z5J4 1906 aaPredicted RBP18.03■□□□□ 0.48
RPUSD3-210ENST00000460909 ARPC4-TTLL3A0A0A6YYG9 625 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 UNC119BA6NIH7 251 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 PLAUP00749 431 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 HOXB1P14653 301 aaPredicted RBP18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 HOXB6P17509 224 aaKnown RBP18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 FPR3P25089 353 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 GSSP48637 474 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 ZNF133P52736 654 aaPredicted RBP18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 BSPH1Q075Z2 132 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 PPP1R8Q12972 351 aaKnown RBP18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 PGBD2Q6P3X8 592 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 THSD4Q6ZMP0 1018 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 CCDC121Q6ZUS5 278 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 HDDC2Q7Z4H3 204 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 PAPD5Q8NDF8 572 aaKnown RBP18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 NOXO1Q8NFA2 376 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 SLCO4A1Q96BD0 722 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 GPX7Q96SL4 187 aaPredicted RBP18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 KATNB1Q9BVA0 655 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 ESRP2Q9H6T0 727 aaKnown RBP18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 OBP2BQ9NPH6 170 aa18.02■□□□□ 0.48
RPUSD3-210ENST00000460909 SEC14L2O76054 403 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 NDUFB2O95178 105 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 CD14P08571 375 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 QDPRP09417 244 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 IFNGR2P38484 337 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 ERFP50548 548 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 CLRN1P58418 232 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 ERVK-25P63136 954 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 TOP3AQ13472 1001 aaPredicted RBP18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 FAM122BQ7Z309 247 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 LINC00471Q8N535 108 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 SYT14Q8NB59 555 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 OR9Q2Q8NGE9 314 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 MCHR2Q969V1 340 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 UTP4Q969X6 686 aaKnown RBP18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 C1QTNF6Q9BXI9 259 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 REEP1Q9H902 201 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 CCM2LQ9NUG4 571 aaPredicted RBP18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 STX18Q9P2W9 335 aaKnown RBP18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 ADAM18Q9Y3Q7 739 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 SAMHD1Q9Y3Z3 626 aaKnown RBP18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 U3KQV3 271 aa18.01■□□□□ 0.47
RPUSD3-210ENST00000460909 ZNF503-AS2A6NEH8 195 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 EBAG9O00559 213 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 DHHO43323 396 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 WNT11O96014 354 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 HOXC12P31275 282 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 ACVR1BP36896 505 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 ZNF83P51522 516 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 TSPAN31Q12999 210 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 ZNF704Q6ZNC4 412 aaPredicted RBP18■□□□□ 0.47
RPUSD3-210ENST00000460909 CDH24Q86UP0 819 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 CLDN22Q8N7P3 220 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 ARIH2OSQ8N7S6 290 aa18■□□□□ 0.47
RPUSD3-210ENST00000460909 LILRB1Q8NHL6 650 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms