RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 RABL6Q3YEC7 729 aaPredicted RBP0.6□□□□□ -2.31
PTPN22-203ENST00000460620 AP1ARQ63HQ0 302 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 ZFP1Q6P2D0 407 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 PRMT9Q6P2P2 845 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 CALHM1Q8IU99 346 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 COQ8AQ8NI60 647 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 CREB3L1Q96BA8 519 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 EFHD2Q96C19 240 aaPredicted RBP0.6□□□□□ -2.31
PTPN22-203ENST00000460620 RIT2Q99578 217 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 ZSCAN5AQ9BUG6 496 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 OSBPL10Q9BXB5 764 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 THAP9Q9H5L6 903 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 TMCO1Q9UM00 188 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 CHMP2BQ9UQN3 213 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 A0A1B0GVI7 797 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 CIB4A0PJX0 185 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 ZNF98A6NK75 572 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 KMOO15229 486 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 YIF1AO95070 293 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 AP2A1O95782 977 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 IGHDP01880 384 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 DNAJB1P25685 340 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 HTR2AP28223 471 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 ACADVLP49748 655 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 CCDC184Q52MB2 194 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 SMUG1Q53HV7 270 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 RBM43Q6ZSC3 357 aaKnown RBP0.6□□□□□ -2.31
PTPN22-203ENST00000460620 NCCRP1Q6ZVX7 275 aaPredicted RBP0.6□□□□□ -2.31
PTPN22-203ENST00000460620 CCDC65Q8IXS2 484 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 SLC35F2Q8IXU6 374 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 IPMKQ8NFU5 416 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 OR4S2Q8NH73 311 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 LILRB4Q8NHJ6 448 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 LKAAEAR1Q8TD35 194 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 C15orf40Q8WUR7 153 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 FAM3CQ92520 227 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 ANGPTL4Q9BY76 406 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 TMEM117Q9H0C3 514 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 DPH5Q9H2P9 285 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 UGT1A7Q9HAW7 530 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 UGT1A10Q9HAW8 530 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 UGT1A8Q9HAW9 530 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 LY9Q9HBG7 655 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 SGK2Q9HBY8 427 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 IL36GQ9NZH8 169 aa0.6□□□□□ -2.31
PTPN22-203ENST00000460620 DHCR7Q9UBM7 475 aaKnown RBP0.6□□□□□ -2.31
PTPN22-203ENST00000460620 COL5A3P25940 1745 aaPredicted RBP0.59□□□□□ -2.31
PTPN22-203ENST00000460620 A0A0U1RQV1 116 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 ZSCAN12O43309 604 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 TBX19O60806 448 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 GCM2O75603 506 aaPredicted RBP0.59□□□□□ -2.32
PTPN22-203ENST00000460620 MBD3O95983 291 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 WARSP23381 471 aaKnown RBP0.59□□□□□ -2.32
PTPN22-203ENST00000460620 GCAP28676 217 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 GPR6P46095 362 aaPredicted RBP0.59□□□□□ -2.32
PTPN22-203ENST00000460620 SUB1P53999 127 aaKnown RBP eCLIP0.59□□□□□ -2.32
PTPN22-203ENST00000460620 MESDQ14696 234 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 PON3Q15166 354 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 CNIH2Q6PI25 160 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 ACOT4Q8N9L9 421 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 ZNF680Q8NEM1 530 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 OR5D13Q8NGL4 314 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 OR13G1Q8NGZ3 307 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 SDR42E1Q8WUS8 393 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 SPRYD4Q8WW59 207 aaPredicted RBP0.59□□□□□ -2.32
PTPN22-203ENST00000460620 UFD1Q92890 307 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 OXGR1Q96P68 337 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 RNF2Q99496 336 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 LZTS2Q9BRK4 669 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 TMEM59Q9BXS4 323 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 MMP17Q9ULZ9 603 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 PSG8Q9UQ74 426 aa0.59□□□□□ -2.32
PTPN22-203ENST00000460620 COL11A1P12107 1806 aaPredicted RBP0.59□□□□□ -2.32
PTPN22-203ENST00000460620 OR1F1O43749 312 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 OXSR1O95747 527 aaPredicted RBP0.58□□□□□ -2.32
PTPN22-203ENST00000460620 FABP3P05413 133 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 IL1RNP18510 177 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 TCN1P20061 433 aaPredicted RBP0.58□□□□□ -2.32
PTPN22-203ENST00000460620 MMP11P24347 488 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 GSSP48637 474 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 GDI2P50395 445 aaKnown RBP0.58□□□□□ -2.32
PTPN22-203ENST00000460620 PRKCDQ05655 676 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 TNFRSF9Q07011 255 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 IFT88Q13099 833 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 GGTA1PQ4G0N0 100 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 RAB12Q6IQ22 244 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 TICAM2Q86XR7 235 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 CCDC50Q8IVM0 306 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 FAM9BQ8IZU0 186 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 GMCL1P1Q8NEA9 526 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 FAM110BQ8TC76 370 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 SLC25A46Q96AG3 418 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 SGK3Q96BR1 496 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 ZNF681Q96N22 645 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 SH3GL3Q99963 347 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 SHANK2-AS3Q9BTD1 123 aa0.58□□□□□ -2.32
PTPN22-203ENST00000460620 MRPL37Q9BZE1 423 aaKnown RBP0.58□□□□□ -2.32
PTPN22-203ENST00000460620 NHEJ1Q9H9Q4 299 aaPredicted RBP0.58□□□□□ -2.32
PTPN22-203ENST00000460620 FBXO6Q9NRD1 293 aaPredicted RBP0.58□□□□□ -2.32
PTPN22-203ENST00000460620 CTSFQ9UBX1 484 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms