RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 UPK3AO75631 287 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 FGF18O76093 207 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 NDUFB2O95178 105 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 AGR2O95994 175 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 WNT11O96014 354 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 LRG1P02750 347 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 IFNA4P05014 189 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 CSN2P05814 226 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ITGA5P08648 1049 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ADRB3P13945 408 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 EPCAMP16422 314 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 POU3F4P49335 361 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 RAB28P51157 221 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 GAS6Q14393 721 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ALG10BQ5I7T1 473 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ATPAF1Q5TC12 328 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ACOT7LQ6ZUV0 252 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 DEFB128Q7Z7B8 93 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 GTPBP8Q8N3Z3 284 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 COX18Q8N8Q8 333 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 CCDC74AQ96AQ1 378 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ALX4Q9H161 411 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ZMAT3Q9HA38 289 aaKnown RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 TREM1Q9NP99 234 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 COMMD9Q9P000 198 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 MRM2Q9UI43 246 aaKnown RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 TINAGQ9UJW2 476 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 FARSAQ9Y285 508 aaKnown RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 NOP16Q9Y3C1 178 aaKnown RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 FAM96BQ9Y3D0 163 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF705EA8MWA4 302 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 SCAMP1O15126 338 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 CCL16O15467 120 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ICOSLGO75144 302 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 FARS2O95363 451 aaKnown RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 AMY2AP04746 511 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 CD34P28906 385 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 EMDP50402 254 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ALKBH1Q13686 389 aaKnown RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 HABP2Q14520 560 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF234Q14588 700 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 INPP5JQ15735 1006 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 C10orf91Q5T1B1 145 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ARHGAP40Q5TG30 622 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 FAM109BQ6ICB4 259 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ENPP7Q6UWV6 458 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF600Q6ZNG1 722 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF227Q86WZ6 799 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 TMEFF1Q8IYR6 380 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 CCDC107Q8WV48 283 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ASB13Q8WXK3 278 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 COX14Q96I36 57 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 BCL2L14Q9BZR8 327 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 ZDHHC4Q9NPG8 344 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 NIT2Q9NQR4 276 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 C14orf105Q9NVL8 296 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 CARHSP1Q9Y2V2 147 aaKnown RBP9.38□□□□□ -0.91
CLIP4-208ENST00000456385 OR1A2Q9Y585 309 aa9.38□□□□□ -0.91
CLIP4-208ENST00000456385 CACNA1CQ13936 2221 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 TRBV23-1A0A0A0MS06 115 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 RAB3DO95716 219 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF888P0CJ79 500 aaPredicted RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 SLC25A4P12235 298 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 PEBP1P30086 187 aaKnown RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 NR0B1P51843 470 aaKnown RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 EXOSC7Q15024 291 aaKnown RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 C2orf76Q3KRA6 126 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 LINC01590Q5TEZ4 76 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 OTPQ5XKR4 325 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 TMEM205Q6UW68 189 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF813Q6ZN06 617 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 MTSS1LQ765P7 747 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF765Q7L2R6 523 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 FAM122BQ7Z309 247 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ANKRD33Q7Z3H0 272 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 CACUL1Q86Y37 369 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 OR2L3Q8NG85 312 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 OR5AP2Q8NGF4 316 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 OR1J4Q8NGS1 313 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF426Q9BUY5 554 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ALG12Q9BV10 488 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 RXFP3Q9NSD7 469 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 KCNK6Q9Y257 313 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ENTPD2Q9Y5L3 495 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 TRBV5-5A0A0J9YX44 114 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 RAD1O60671 282 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 LDB3O75112 727 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 NDUFS6O75380 124 aaKnown RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 SNAPINO95295 136 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 AVPR2P30518 371 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 HAAOP46952 286 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 PSMD4P55036 377 aaKnown RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 CDK3Q00526 305 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 C3orf33Q6P1S2 294 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 RHOUQ7L0Q8 258 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms