RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 DCUN1D3Q8IWE4 304 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 OR56A3Q8NH54 315 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 PAQR8Q8TEZ7 354 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 LRFN5Q96NI6 719 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 DMRT3Q9NQL9 472 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 ASF1BQ9NVP2 202 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 MBD2Q9UBB5 411 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 MTFP1Q9UDX5 166 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 PPIAL4AQ9Y536 164 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 MALRD1Q5VYJ5 2156 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 MXRA5Q9NR99 2828 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A0G2JLL6 359 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SMIM35A0A1B0GVV1 85 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 C7orf77A4D0Y5 90 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF840PA6NDX5 716 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 GABARAPH6UMI1 98 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 FAAHO00519 579 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 PEX12O00623 359 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SPINT1O43278 529 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SERPINA3P01011 423 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 RPA2P15927 270 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 DGKAP23743 735 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SOAT1P35610 550 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 STARD6P59095 220 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 LGALS3BPQ08380 585 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 POU4F2Q12837 409 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 FAM53BQ14153 422 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC9A5Q14940 896 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TXNDC8Q6A555 127 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 Q6ZVH6 145 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TTLL10Q6ZVT0 673 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MBOAT2Q6ZWT7 520 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MDGA2Q7Z553 956 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 PRRT2Q7Z6L0 340 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TMED4Q7Z7H5 227 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 LRP11Q86VZ4 500 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CFAP206Q8IYR0 622 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 POM121Q96HA1 1249 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 DZANK1Q9NVP4 752 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC5A10A0PJK1 596 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MPZL2O60487 215 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 UPK3AO75631 287 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SERPIND1P05546 499 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SMIM6P0DI80 62 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 RPS2P15880 293 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H1BP16401 226 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 RBMS1P29558 406 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 BUD31P41223 144 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 IL15RAQ13261 267 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TSTA3Q13630 321 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 RSPO4Q2I0M5 234 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM44Q2T9K0 475 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 HS6ST3Q8IZP7 471 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF664Q8N3J9 261 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 OR6N1Q8NGY5 312 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 AP3S1Q92572 193 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 NTNG2Q96CW9 530 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 HAVCR1Q96D42 359 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TCTN2Q96GX1 697 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 AKR1E2Q96JD6 320 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SUSD3Q96L08 255 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF681Q96N22 645 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ADAM2Q99965 735 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MESP1Q9BRJ9 268 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 G6PC3Q9BUM1 346 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 HRH4Q9H3N8 390 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 H2AFY2Q9P0M6 372 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF282Q9UDV7 671 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CACFD1Q9UGQ2 172 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 GLS2Q9UI32 602 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 NUP210LQ5VU65 1888 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A1B0GUS0 222 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A1W2PP11 408 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SERTM1A2A2V5 107 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF705EA8MWA4 302 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 H7BY64 318 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CLDN4O14493 209 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MSTNO14793 375 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 FKTNO75072 461 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 FARS2O95363 451 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TXNDC12O95881 172 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CD8AP01732 235 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 GLI4P10075 376 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF28P17035 718 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CORO1AP31146 461 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ATP6V1E1P36543 226 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 GABRA4P48169 554 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SPINT3P49223 89 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TRA2AQ13595 282 aaKnown RBP eCLIP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 GRHL2Q6ISB3 625 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MSANTD1Q6ZTZ1 278 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 LINGO2Q7L985 606 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 GDF7Q7Z4P5 450 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEFF1Q8IYR6 380 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CMTM8Q8IZV2 173 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM86AQ8N2M4 240 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 LRRC18Q8N456 261 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MEIOBQ8N635 442 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 OR8S1Q8NH09 359 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 FBXO32Q969P5 355 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms