RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 SEC23BQ15437 767 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 LINC00114Q6XXX2 140 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 TMEM179BQ7Z7N9 219 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 PFN4Q8NHR9 129 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 SLC7A13Q8TCU3 470 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 SLC25A43Q8WUT9 341 aaPredicted RBP11.74□□□□□ -0.53
PSMC4-202ENST00000455878 ZNF426Q9BUY5 554 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 SEMA6AQ9H2E6 1030 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 REEP1Q9H902 201 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 NTN4Q9HB63 628 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 NPAP1Q9NZP6 1156 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 DNAJB9Q9UBS3 223 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 SAMHD1Q9Y3Z3 626 aaKnown RBP11.74□□□□□ -0.53
PSMC4-202ENST00000455878 ATP23Q9Y6H3 246 aa11.74□□□□□ -0.53
PSMC4-202ENST00000455878 PLCE1Q9P212 2302 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 A0A087WUU8 490 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 A0A1W2PRQ8 180 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 GNGT2O14610 69 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 DEAF1O75398 565 aaPredicted RBP11.73□□□□□ -0.53
PSMC4-202ENST00000455878 BAG2O95816 211 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 COX5AP20674 150 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 EGR4Q05215 589 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 DGCR6Q14129 220 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 SYT14P1Q58G82 188 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 ZNF544Q6NX49 715 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 TBPL2Q6SJ96 375 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 MEX3DQ86XN8 651 aaKnown RBP11.73□□□□□ -0.53
PSMC4-202ENST00000455878 C10orf67Q8IYJ2 551 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 PQLC1Q8N2U9 271 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 TMEM239Q8WW34 195 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 HTRA1Q92743 480 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 MPP4Q96JB8 637 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 C1QTNF6Q9BXI9 259 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 ANKRD19PQ9H560 264 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 FKRPQ9H9S5 495 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 PARPBPQ9NWS1 579 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 TAS2R16Q9NYV7 291 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 UPB1Q9UBR1 384 aa11.73□□□□□ -0.53
PSMC4-202ENST00000455878 HEATR1Q9H583 2144 aaKnown RBP11.73□□□□□ -0.53
PSMC4-202ENST00000455878 IGKV3D-15A0A087WSY6 115 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 A0A1W2PR80 420 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 SH3PXD2BA1X283 911 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 ZNF208O43345 1280 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 F12P00748 615 aaPredicted RBP11.72□□□□□ -0.53
PSMC4-202ENST00000455878 CSF3P09919 207 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 USF1P22415 310 aaPredicted RBP11.72□□□□□ -0.53
PSMC4-202ENST00000455878 EDNRAP25101 427 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
PSMC4-202ENST00000455878 CLK1P49759 484 aaKnown RBP11.72□□□□□ -0.53
PSMC4-202ENST00000455878 EFNA4P52798 201 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 TTC33Q6PID6 262 aaPredicted RBP11.72□□□□□ -0.53
PSMC4-202ENST00000455878 ZNF730Q6ZMV8 503 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 HS3ST5Q8IZT8 346 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 OR9Q2Q8NGE9 314 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 PIGXQ8TBF5 258 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 ACOT11Q8WXI4 607 aaPredicted RBP11.72□□□□□ -0.53
PSMC4-202ENST00000455878 KTI12Q96EK9 354 aaPredicted RBP11.72□□□□□ -0.53
PSMC4-202ENST00000455878 ARL5BQ96KC2 179 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 MUS81Q96NY9 551 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 EPYCQ99645 322 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 TMEM43Q9BTV4 400 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 PTDSS2Q9BVG9 487 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 MEPEQ9NQ76 525 aaPredicted RBP11.72□□□□□ -0.53
PSMC4-202ENST00000455878 C20orf141Q9NUB4 165 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 SLC25A15Q9Y619 301 aa11.72□□□□□ -0.53
PSMC4-202ENST00000455878 SAC3D1A6NKF1 404 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 A8MVM7 634 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 LRRN3E7EW58 273 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 H7C417 338 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 NPIPB7O75200 414 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 E2F6O75461 281 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 ANPEPP15144 967 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 APOBEC3AP31941 199 aaPredicted RBP11.71□□□□□ -0.53
PSMC4-202ENST00000455878 RPS5P46782 204 aaKnown RBP11.71□□□□□ -0.53
PSMC4-202ENST00000455878 HMGA2P52926 109 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 OR2B6P58173 313 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 SMIM11AP58511 58 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 TGFBR3Q03167 851 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 GABRA6Q16445 453 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 C1orf140Q5VVS0 124 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 C11orf71Q6IPW1 123 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 MBOAT2Q6ZWT7 520 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 EPHX4Q8IUS5 362 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 NRMQ8IXM6 262 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 ICA1LQ8NDH6 482 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 OR4K5Q8NGD3 323 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 STK35Q8TDR2 534 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 DDIT4LQ96D03 193 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 NKX1-2Q9UD57 310 aaPredicted RBP11.71□□□□□ -0.53
PSMC4-202ENST00000455878 MED31Q9Y3C7 131 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 HDGFL3Q9Y3E1 203 aa11.71□□□□□ -0.53
PSMC4-202ENST00000455878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.533e-6■■■□□ 17.2
PSMC4-202ENST00000455878 TRAV36DV7A0A075B6V5 113 aa11.7□□□□□ -0.54
PSMC4-202ENST00000455878 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
PSMC4-202ENST00000455878 DNPH1O43598 174 aa11.7□□□□□ -0.54
PSMC4-202ENST00000455878 MGRN1O60291 552 aa11.7□□□□□ -0.54
PSMC4-202ENST00000455878 LMX1BO60663 402 aa11.7□□□□□ -0.54
PSMC4-202ENST00000455878 CCNB2O95067 398 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms