RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 HS6ST2Q96MM7 605 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 GPR137Q96N19 417 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 CNPPD1Q9BV87 410 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 KATNB1Q9BVA0 655 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SPATA5L1Q9BVQ7 753 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 TSSK6Q9BXA6 273 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SYNDIG1Q9H7V2 258 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SH3GLB1Q9Y371 365 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 TRAV36DV7A0A075B6V5 113 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 TMED7-TICAM2A0A0A6YYA0 188 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 CPSF4LA6NMK7 179 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 TTLL8A6PVC2 850 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 A8MVM7 634 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 CCRL2O00421 344 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 OR10H2O60403 315 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 UPK3AO75631 287 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 RAB36O95755 333 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 FKBP2P26885 142 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 IDH2P48735 452 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 MECP2P51608 486 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 PPP5CP53041 499 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 IL5RAQ01344 420 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 ST3GAL3Q11203 375 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 MYBPHQ13203 477 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 GALEQ14376 348 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SLC6A19Q695T7 634 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 CREB3L2Q70SY1 520 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 AHSA2Q719I0 299 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 FAM109AQ8N4B1 249 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 PARP16Q8N5Y8 322 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 MINDY2Q8NBR6 621 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SLC37A3Q8NCC5 494 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 DUSP19Q8WTR2 217 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 OR2M2Q96R28 347 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 MGLLQ99685 303 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SF3B5Q9BWJ5 86 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 MND1Q9BWT6 205 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 INPP5EQ9NRR6 644 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 ALKBH4Q9NXW9 302 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 FBLN5Q9UBX5 448 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SEC14L3Q9UDX4 400 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 STUB1Q9UNE7 303 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 TMED7Q9Y3B3 224 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 TRBV5-5A0A0J9YX44 114 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 C9J4A7 227 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 LINC01387J3KSC0 135 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 PPP1R3DO95685 299 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 BCL10O95999 233 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 NR2F1P10589 423 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 CRYGSP22914 178 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 DNASE1L1P49184 302 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 RNF144AP50876 292 aaPredicted RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 WNT4P56705 351 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 IL1RL1Q01638 556 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 HGFACQ04756 655 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 RPL18Q07020 188 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 SELENBP1Q13228 472 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 ZNF181Q2M3W8 571 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 LRFN4Q6PJG9 635 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 DPY19L2P2Q6ZN68 376 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 NRMQ8IXM6 262 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 IL17RDQ8NFM7 739 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 KCNE4Q8WWG9 221 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 HSD17B8Q92506 261 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 FER1L6-AS2Q96M78 137 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 GNRHR2Q96P88 292 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 ISG20L2Q9H9L3 353 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 INIPQ9NRY2 104 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 RASSF1Q9NS23 344 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 COPS7AQ9UBW8 275 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 KLHDC2Q9Y2U9 406 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 TRBV5-7A0A0A0MS05 114 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 FUOMA2VDF0 154 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 ISPDA4D126 451 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 CD8B2A6NJW9 211 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 EFCAB9A8MZ26 197 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 ATXN7O15265 892 aaPredicted RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 IDH3BO43837 385 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 CCL1P22362 96 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 NOS3P29474 1203 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SOAT1P35610 550 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 MAGEA5P43359 124 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 MEOX1P50221 254 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SMSP52788 366 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 NUDT6P53370 316 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 RPS15P62841 145 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 RPS25P62851 125 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 GINS1Q14691 196 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 C3orf36Q3SXR2 165 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 GPAT3Q53EU6 434 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 KLHL12Q53G59 568 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 ARMCX4Q5H9R4 360 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 C1orf140Q5VVS0 124 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SLC22A10Q63ZE4 541 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 STEAP3Q658P3 488 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SLC25A25Q6KCM7 469 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 SLC27A4Q6P1M0 643 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 ZNF730Q6ZMV8 503 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 TAGAPQ8N103 731 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 CENPSQ8N2Z9 138 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms