RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 OR7A10O76100 309 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 F12P00748 615 aaPredicted RBP10.43□□□□□ -0.74
USP40-210ENST00000454354 HLA-HP01893 362 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 HIST1H2ABP04908 130 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 PGA4P0DJD7 388 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 PGA3P0DJD8 388 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 UMPSP11172 480 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 SLC25A16P16260 332 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 ZNF14P17017 642 aaPredicted RBP10.43□□□□□ -0.74
USP40-210ENST00000454354 PCSK6P29122 969 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 CAPZA2P47755 286 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 OR1E2P47887 323 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 PPOXP50336 477 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 SELENOWP63302 87 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 PPP2R2BQ00005 443 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 NPRL3Q12980 569 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 PIN1Q13526 163 aaPredicted RBP10.43□□□□□ -0.74
USP40-210ENST00000454354 HIST3H3Q16695 136 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 GSG1Q2KHT4 349 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 HACD2Q6Y1H2 254 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 HIST3H2AQ7L7L0 130 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 PIWIL3Q7Z3Z3 882 aaKnown RBP10.43□□□□□ -0.74
USP40-210ENST00000454354 SLC15A3Q8IY34 581 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 ZNF525Q8N782 197 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 PFN4Q8NHR9 129 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 C10orf105Q8TEF2 133 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 TMEM239Q8WW34 195 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 NANOS1Q8WY41 292 aaKnown RBP10.43□□□□□ -0.74
USP40-210ENST00000454354 HTRA1Q92743 480 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 HIST1H2ACQ93077 130 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 ZNF566Q969W8 418 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 PRRC1Q96M27 445 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 SEPHS2Q99611 448 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 C20orf141Q9NUB4 165 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 FBXO9Q9UK97 447 aaPredicted RBP10.43□□□□□ -0.74
USP40-210ENST00000454354 FBXL3Q9UKT7 428 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 CUBNO60494 3623 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 COL6A5A8TX70 2615 aa10.43□□□□□ -0.74
USP40-210ENST00000454354 DNHD1Q96M86 4753 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 HTR3EA5X5Y0 456 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 NPIPB13A6NJU9 1138 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 NPIPB4C9JG80 1138 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 SHOX2O60902 331 aaPredicted RBP10.42□□□□□ -0.74
USP40-210ENST00000454354 UBL3O95164 117 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 IGHG1P01857 330 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 OR4A8P0C604 315 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 THBS4P35443 961 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 RPL18Q07020 188 aaKnown RBP10.42□□□□□ -0.74
USP40-210ENST00000454354 LOXL1Q08397 574 aaPredicted RBP10.42□□□□□ -0.74
USP40-210ENST00000454354 MELKQ14680 651 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 LRFN4Q6PJG9 635 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 HDDC2Q7Z4H3 204 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 TREML1Q86YW5 311 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 OFCC1Q8IZS5 231 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 FAM168AQ92567 244 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 SGTBQ96EQ0 304 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 SORCS2Q96PQ0 1159 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 HOPXQ9BPY8 73 aaPredicted RBP10.42□□□□□ -0.74
USP40-210ENST00000454354 MRPL13Q9BYD1 178 aaKnown RBP10.42□□□□□ -0.74
USP40-210ENST00000454354 MYOZ1Q9NP98 299 aaPredicted RBP10.42□□□□□ -0.74
USP40-210ENST00000454354 A4GNTQ9UNA3 340 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 FKBP7Q9Y680 259 aa10.42□□□□□ -0.74
USP40-210ENST00000454354 SVEP1Q4LDE5 3571 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 A0A1W2PRG6 482 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 VWC2LB2RUY7 222 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 BLOC1S5-TXNDC5H3BN57 136 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 NDUFS8O00217 210 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 NME4O00746 187 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 DHHO43323 396 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 TLX2O43763 284 aaPredicted RBP10.41□□□□□ -0.74
USP40-210ENST00000454354 ENTPD5O75356 428 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 BCL10O95999 233 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 TP53P04637 393 aaPredicted RBP10.41□□□□□ -0.74
USP40-210ENST00000454354 CD79AP11912 226 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 ZNF35P13682 527 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 FUT1P19526 365 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 NPR2P20594 1047 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 NR4A1P22736 598 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 SLC7A2P52569 658 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 ZNF133P52736 654 aaPredicted RBP10.41□□□□□ -0.74
USP40-210ENST00000454354 LIPEQ05469 1076 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 ST3GAL3Q11203 375 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 SNTB2Q13425 540 aaKnown RBP10.41□□□□□ -0.74
USP40-210ENST00000454354 DAG1Q14118 895 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 NRN1LQ496H8 165 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 CBLL1Q75N03 491 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 SPATA21Q7Z572 469 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 SLC22A24Q8N4F4 322 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 NOXO1Q8NFA2 376 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 ASB10Q8WXI3 467 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 LZICQ8WZA0 190 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 MS4A3Q96HJ5 214 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 TPD52L3Q96J77 140 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 TNFRSF13CQ96RJ3 184 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 MYLK2Q9H1R3 596 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 EFCAB1Q9HAE3 211 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 INIPQ9NRY2 104 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 MAN2C1Q9NTJ4 1040 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 TMEM38BQ9NVV0 291 aa10.41□□□□□ -0.74
USP40-210ENST00000454354 GMPR2Q9P2T1 348 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms