RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 HIST3H3Q16695 136 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 SWI5Q1ZZU3 235 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 CLEC12BQ2HXU8 276 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 MST1LQ2TV78 715 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 LRFN4Q6PJG9 635 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF813Q6ZN06 617 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 MDP1Q86V88 176 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 HSH2DQ96JZ2 352 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 SEPHS2Q99611 448 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 NOX3Q9HBY0 568 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 SPAG4Q9NPE6 437 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 NF1P21359 2839 aa12.65□□□□□ -0.38
HSPG2-207ENST00000453796 HTR3EA5X5Y0 456 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 NPIPB13A6NJU9 1138 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 NPIPB4C9JG80 1138 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 H7C417 338 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 BCL10O95999 233 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 F13BP05160 661 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 B4GALT1P15291 398 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 ARR3P36575 388 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 AQP2P41181 271 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 IDH3GP51553 393 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF133P52736 654 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-207ENST00000453796 HGFACQ04756 655 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 RUNX1T1Q06455 604 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 FHL1Q13642 323 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 FXNQ16595 210 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 RBM15BQ8NDT2 890 aaKnown RBP12.64□□□□□ -0.39
HSPG2-207ENST00000453796 MOSPD2Q8NHP6 518 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 ASB10Q8WXI3 467 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF566Q969W8 418 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 MRPL13Q9BYD1 178 aaKnown RBP12.64□□□□□ -0.39
HSPG2-207ENST00000453796 INIPQ9NRY2 104 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 ARL8BQ9NVJ2 186 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 RHCGQ9UBD6 479 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 EGFL7Q9UHF1 273 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 POFUT2Q9Y2G5 429 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 HIF3AQ9Y2N7 669 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 ARL2BPQ9Y2Y0 163 aa12.64□□□□□ -0.39
HSPG2-207ENST00000453796 A0A087WUU8 490 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 IGHV2OR16-5A0A0B4J2B6 119 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 CENPBD1B2RD01 187 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 DHHO43323 396 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 LY6G6DO95868 133 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 HLA-HP01893 362 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 IFI30P13284 250 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF14P17017 642 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-207ENST00000453796 MAKP20794 623 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 PRKCDQ05655 676 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 LAPTM4AQ15012 233 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 TRAM2Q15035 370 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 ARMC4Q5T2S8 1044 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 GLYATQ6IB77 296 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 PIWIL3Q7Z3Z3 882 aaKnown RBP12.63□□□□□ -0.39
HSPG2-207ENST00000453796 NOXO1Q8NFA2 376 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 NUP37Q8NFH4 326 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 FAM162AQ96A26 154 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 BPIFA2Q96DR5 249 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 C7orf34Q96L11 122 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 KCNS3Q9BQ31 491 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 FNDC11Q9BVV2 318 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 BARX1Q9HBU1 254 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-207ENST00000453796 CA10Q9NS85 328 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 DCAF13Q9NV06 445 aaKnown RBP12.63□□□□□ -0.39
HSPG2-207ENST00000453796 ENPP4Q9Y6X5 453 aa12.63□□□□□ -0.39
HSPG2-207ENST00000453796 NSD1Q96L73 2696 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-207ENST00000453796 RTTNQ86VV8 2226 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 A0A1W2PRG6 482 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 FAM171A2A8MVW0 826 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 SMAD7O15105 426 aaKnown RBP12.62□□□□□ -0.39
HSPG2-207ENST00000453796 TRMUO75648 421 aaKnown RBP12.62□□□□□ -0.39
HSPG2-207ENST00000453796 PDE5AO76074 875 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 IGHG1P01857 330 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 HEXAP06865 529 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 QDPRP09417 244 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 HSD17B1P14061 328 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 ACADSP16219 412 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-207ENST00000453796 IFNA8P32881 189 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 CAPZA2P47755 286 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 NPRL3Q12980 569 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 ADIPOQQ15848 244 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 GSG1Q2KHT4 349 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 IQCCQ4KMZ1 466 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 CLEC9AQ6UXN8 241 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 FKBP9P1Q75LS8 142 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 SKA3Q8IX90 412 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 NRMQ8IXM6 262 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 RNF113BQ8IZP6 322 aaKnown RBP12.62□□□□□ -0.39
HSPG2-207ENST00000453796 PGAM4Q8N0Y7 254 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 RNF148Q8N7C7 305 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 FAM86B1Q8N7N1 296 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 ANKS4BQ8N8V4 417 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 LRRC75AQ8NAA5 344 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 FGFBP3Q8TAT2 258 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 ACOT11Q8WXI4 607 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-207ENST00000453796 MCHR2Q969V1 340 aa12.62□□□□□ -0.39
HSPG2-207ENST00000453796 NMD3Q96D46 503 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms