RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MTURNQ8N3F0 131 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 DNAJC22Q8N4W6 341 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 CCDC54Q8NEL0 328 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR1S2Q8NGQ3 325 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR5K2Q8NHB8 316 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 OSR1Q8TAX0 266 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 ITFG1Q8TB96 612 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 PIGXQ8TBF5 258 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 SETD7Q8WTS6 366 aaKnown RBP3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 APH1BQ8WW43 257 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 NELFBQ8WX92 580 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 ABTB1Q969K4 478 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 PPWD1Q96BP3 646 aaKnown RBP3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 FLYWCH2Q96CP2 140 aaKnown RBP3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAHD2AQ96GK7 314 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 PRAP1Q96NZ9 151 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 LPAR4Q99677 370 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 TRIM51Q9BSJ1 452 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 LHX5Q9H2C1 402 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 TRABDQ9H4I3 376 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 DHX35Q9H5Z1 703 aaKnown RBP3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 GAREM1Q9H706 876 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 GALPQ9UBC7 116 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 ERGIC3Q9Y282 383 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 ARL2BPQ9Y2Y0 163 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZNF337Q9Y3M9 751 aa3.82□□□□□ -1.8
HMGB3P21-201ENST00000452483 A0A0G2JNG1 304 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SLC5A10A0PJK1 596 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAM231BA6NCW3 169 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 EFCAB7A8K855 629 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 C2orf74A8MZ97 194 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 TCP10L2B9ZVM9 353 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 FTCDNL1E5RQL4 147 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 H3BMQ9 156 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 H7C0C1 242 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CCRL2O00421 344 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 TM9SF1O15321 606 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 INPP4BO15327 924 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SLC31A1O15431 190 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SOX15O60248 233 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 HPGDSO60760 199 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 WDR1O75083 606 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 KHDRBS3O75525 346 aaKnown RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 ESRRBO95718 433 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SNAP29O95721 258 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 JCHAINP01591 159 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CDK1P06493 297 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAM157CP0CG43 387 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAM106CPP0CH98 169 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CRABP2P29373 138 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 VHLP40337 213 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 XCR1P46094 333 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 OMPP47874 163 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 HCAR3P49019 387 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SERPINB8P50452 374 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CAV2P51636 162 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 AP2S1P53680 142 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CDH11P55287 796 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 B3GALT5-AS1P59052 145 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 ABCE1P61221 599 aaKnown RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 PRKCDQ05655 676 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 ARL16Q0P5N6 197 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 MLLT11Q13015 90 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SRSF6Q13247 344 aaKnown RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 ITPK1Q13572 414 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 RAB31Q13636 194 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 GNMTQ14749 295 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 KIR2DS5Q14953 304 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 RAB35Q15286 201 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 TAF1AQ15573 450 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 DUSP5Q16690 384 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 DUSP6Q16828 381 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 PRTGQ2VWP7 1150 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 TMEM52BQ4KMG9 183 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 FFAR4Q5NUL3 377 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 PIK3CD-AS1Q5SR53 167 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 MEDAGQ5VYS4 303 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR8G2PQ6IF36 304 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 ZNF530Q6P9A1 599 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 ATRAIDQ6UW56 229 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 LCLAT1Q6UWP7 414 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SLC16A12Q6ZSM3 486 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 Q6ZSR9 355 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 FAM92BQ6ZTR7 304 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 USP43Q70EL4 1123 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SLC47A2Q86VL8 602 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 PLA2G4DQ86XP0 818 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CALHM1Q8IU99 346 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 VRK3Q8IV63 474 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 ABHD12Q8N2K0 398 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 GVQW1Q8N7I0 195 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 C15orf54Q8N8G6 183 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 CATSPER1Q8NEC5 780 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 VN1R2Q8NFZ6 395 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR2T12Q8NG77 320 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR9Q2Q8NGE9 314 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 OR51F2Q8NH61 342 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 SFXN5Q8TD22 340 aa3.81□□□□□ -1.8
HMGB3P21-201ENST00000452483 RAB3CQ96E17 227 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms