RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 MELKQ14680 651 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 ACKR1Q16570 336 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 CEACAM16Q2WEN9 425 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 FAM98BQ52LJ0 330 aaKnown RBP17.47■□□□□ 0.39
COL9A3-202ENST00000452372 OR13C2Q8NGS9 318 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 OR52N5Q8NH56 324 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 BCL2L2Q92843 193 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-202ENST00000452372 TMEM54Q969K7 222 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 ZNF566Q969W8 418 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 ZNF837Q96EG3 531 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-202ENST00000452372 HS3ST6Q96QI5 342 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 TXNIPQ9H3M7 391 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 ESRP2Q9H6T0 727 aaKnown RBP17.47■□□□□ 0.39
COL9A3-202ENST00000452372 KRCC1Q9NPI7 259 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-202ENST00000452372 POMPQ9Y244 141 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 AMDHD2Q9Y303 409 aa17.47■□□□□ 0.39
COL9A3-202ENST00000452372 A0A1W2PR80 420 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 HOXB1P14653 301 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-202ENST00000452372 LIMS1P48059 325 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 PRPS1P60891 318 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 ARF1P84077 181 aaKnown RBP17.46■□□□□ 0.39
COL9A3-202ENST00000452372 TAF11Q15544 211 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 ZBED5Q49AG3 693 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 HIKESHIQ53FT3 197 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 NCMAPQ5T1S8 102 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 ARMC4Q5T2S8 1044 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 ANKRD16Q6P6B7 361 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 HDDC2Q7Z4H3 204 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 LRRC75AQ8NAA5 344 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 MAGEE2Q8TD90 523 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-202ENST00000452372 ASB10Q8WXI3 467 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 TMEM204Q9BSN7 226 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 OBP2BQ9NPH6 170 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 GLTPQ9NZD2 209 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 NPAP1Q9NZP6 1156 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 TMCC3Q9ULS5 477 aa17.46■□□□□ 0.39
COL9A3-202ENST00000452372 DPRXA6NFQ7 191 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF99A8MXY4 864 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-202ENST00000452372 CENPBD1B2RD01 187 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 MCIDASD6RGH6 385 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 PTP4A3O75365 173 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 RAF1P04049 648 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 PGA4P0DJD7 388 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 PGA3P0DJD8 388 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 RAP2AP10114 183 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 HOXC12P31275 282 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 CTXN1P60606 82 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 FLOT2Q14254 428 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 HIST3H3Q16695 136 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 TBRG1Q3YBR2 411 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 ZER1Q7Z7L7 766 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 ADGRG5Q8IZF4 528 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 MRPL13Q9BYD1 178 aaKnown RBP17.45■□□□□ 0.38
COL9A3-202ENST00000452372 ULBP2Q9BZM5 246 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 MMADHCQ9H3L0 296 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-202ENST00000452372 NELFAQ9H3P2 528 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 STX18Q9P2W9 335 aaKnown RBP17.45■□□□□ 0.38
COL9A3-202ENST00000452372 SLC7A8Q9UHI5 535 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 AURKCQ9UQB9 309 aa17.45■□□□□ 0.38
COL9A3-202ENST00000452372 MAGED1Q9Y5V3 778 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-202ENST00000452372 HEATR1Q9H583 2144 aaKnown RBP17.45■□□□□ 0.38
COL9A3-202ENST00000452372 WNT11O96014 354 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 IGHG1P01857 330 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 IGHMP01871 453 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 ACADSP16219 412 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 HOXB6P17509 224 aaKnown RBP17.44■□□□□ 0.38
COL9A3-202ENST00000452372 PAX7P23759 505 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 RUNX1T1Q06455 604 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 BSPH1Q075Z2 132 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 DEFB113Q30KQ7 82 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 LRFN4Q6PJG9 635 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 KLHL24Q6TFL4 600 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF627Q7L945 461 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 POM121Q96HA1 1249 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 EDARQ9UNE0 448 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 SIGLEC7Q9Y286 467 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 LYVE1Q9Y5Y7 322 aa17.44■□□□□ 0.38
COL9A3-202ENST00000452372 A0A096LPE4 126 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 ARPC4-TTLL3A0A0A6YYG9 625 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 A0A1W2PPZ6 126 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 DHRS12A0PJE2 317 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 TNFRSF11BO00300 401 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 OR10H3O60404 316 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 TRMUO75648 421 aaKnown RBP17.43■□□□□ 0.38
COL9A3-202ENST00000452372 PLAUP00749 431 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 CD3EP07766 207 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 CD53P19397 219 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 IFNGR2P38484 337 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 CLRN1P58418 232 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 RPL27P61353 136 aaKnown RBP17.43■□□□□ 0.38
COL9A3-202ENST00000452372 OR2T5Q6IEZ7 315 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 C1orf94Q6P1W5 598 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 KLHL17Q6TDP4 642 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 ZNF704Q6ZNC4 412 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-202ENST00000452372 KRTAP1-3Q8IUG1 177 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 LINC00471Q8N535 108 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 OR2T29Q8NH02 315 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 CANT1Q8WVQ1 401 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 GPA33Q99795 319 aa17.43■□□□□ 0.38
COL9A3-202ENST00000452372 CHID1Q9BWS9 393 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms