RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 ADAM19Q9H013 955 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 LRRN3Q9H3W5 708 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 NRIP3Q9NQ35 241 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 FBXL4Q9UKA2 621 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 IER3IP1Q9Y5U9 82 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 G3V3Q6 166 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 M0R233 179 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 SIGLEC6O43699 453 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 SDHBP21912 280 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 SLC6A8P48029 635 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 NR0B1P51843 470 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 AKR1D1P51857 326 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 PRPS1P60891 318 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 RPS7P62081 194 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 CCL7P80098 99 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 HLA-BQ31612 363 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 SLC36A2Q495M3 483 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 SLC29A4Q7RTT9 530 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 PRR22Q8IZ63 422 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 BEST4Q8NFU0 473 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 OR52E2Q8NGJ4 325 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 ZNF524Q96C55 264 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 RADILQ96JH8 1075 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 RTN4RQ9BZR6 473 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 NRSN2Q9GZP1 204 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 SCP2D1Q9UJQ7 156 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 COPS3Q9UNS2 423 aa13.9□□□□□ -0.18
CCHCR1-208ENST00000451521 CPED1A4D0V7 1026 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 CFIP05156 583 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 GIFP27352 417 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 IL12BP29460 328 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 RBMS1P29558 406 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 RPL35P42766 123 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 PITPNBP48739 271 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 PNLIPRP2P54317 469 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 LYPD4Q6UWN0 246 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 OR10H4Q8NGA5 316 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 OR2T4Q8NH00 348 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 SEC22CQ9BRL7 303 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 SHARPINQ9H0F6 387 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 SDHAF2Q9NX18 166 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 ALG1L2C9J202 215 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 TOXO94900 526 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 ZNF85Q03923 595 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 ZNF117Q03924 483 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 EGR4Q05215 589 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 GGTLC2Q14390 218 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 ZNF74Q16587 644 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 GSG1Q2KHT4 349 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 LANCL3Q6ZV70 420 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 SAMD12Q8N8I0 201 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 OR4K13Q8NH42 304 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 OR8K3Q8NH51 312 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 STT3BQ8TCJ2 826 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 SMPDL3BQ92485 455 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 PCDHB16Q9NRJ7 776 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 KIF25Q9UIL4 384 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 PPIEQ9UNP9 301 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 HIF3AQ9Y2N7 669 aa13.89□□□□□ -0.19
CCHCR1-208ENST00000451521 CDC14CA4D256 554 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 MFSD2BA6NFX1 497 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 EIF4E2O60573 245 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 HOXB1P14653 301 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 CD53P19397 219 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 NUP62P37198 522 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 CCR4P51679 360 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 SLC16A1P53985 500 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 ZP1P60852 638 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 ACTC1P68032 377 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 ACTA1P68133 377 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 PEAR1Q5VY43 1037 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 HBMQ6B0K9 141 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 FTMTQ8N4E7 242 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 SLC38A9Q8NBW4 561 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 FAM98AQ8NCA5 519 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 NPEPL1Q8NDH3 523 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 SDR9C7Q8NEX9 313 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 OR2T35Q8NGX2 323 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 TBX5Q99593 518 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 KLHDC3Q9BQ90 382 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 SIRT4Q9Y6E7 314 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 IGHV5-10-1A0A0J9YXX1 117 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 TUBAL3A6NHL2 446 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 YKT6O15498 198 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 RNF13O43567 381 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 ONECUT2O95948 504 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 MT-ND5P03915 603 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 ABCD3P28288 659 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 GRK6P43250 576 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 CAPZA2P47755 286 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 PLCXD2Q0VAA5 305 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 LRRC75AQ8NAA5 344 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 ADAMTS14Q8WXS8 1223 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 C12orf57Q99622 126 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 NMNAT2Q9BZQ4 307 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 SEMA4CQ9C0C4 833 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 MMP25Q9NPA2 562 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 TRIM36Q9NQ86 728 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 CYB5R1Q9UHQ9 305 aa13.88□□□□□ -0.19
CCHCR1-208ENST00000451521 ADAM18Q9Y3Q7 739 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms