RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 APH1AQ96BI3 265 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 SAMD8Q96LT4 415 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 SLC38A2Q96QD8 506 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 EMC6Q9BV81 110 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 IL20RAQ9UHF4 553 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 DIDO1Q9BTC0 2240 aaKnown RBP11.53□□□□□ -0.56
VPS33A-202ENST00000451053 UBR5O95071 2799 aaPredicted RBP11.53□□□□□ -0.56
VPS33A-202ENST00000451053 INTS1Q8N201 2190 aaKnown RBP11.52□□□□□ -0.56
VPS33A-202ENST00000451053 A0A1W2PRG6 482 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 A8MXE2 369 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 IDH3BO43837 385 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 ZNF432O94892 652 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 GRK5P34947 590 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 RPL4P36578 427 aaKnown RBP11.52□□□□□ -0.57
VPS33A-202ENST00000451053 BIDP55957 195 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 CTXN1P60606 82 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 TFF3Q07654 80 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 LGALS3BPQ08380 585 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 TOP3AQ13472 1001 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-202ENST00000451053 ACKR1Q16570 336 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 PGGHGQ32M88 737 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 CARD17Q5XLA6 110 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 C12orf73Q69YU5 71 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 DPY19L2P2Q6ZN68 376 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 THAP5Q7Z6K1 395 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 TMEM123Q8N131 208 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 FAM81AQ8TBF8 368 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 TRUB1Q8WWH5 349 aaKnown RBP11.52□□□□□ -0.57
VPS33A-202ENST00000451053 CNBD2Q96M20 576 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 MUS81Q96NY9 551 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 OR2M2Q96R28 347 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 GPX7Q96SL4 187 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-202ENST00000451053 IFT27Q9BW83 186 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 PLA2G12AQ9BZM1 189 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 KCNJ16Q9NPI9 418 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 PARPBPQ9NWS1 579 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 RCE1Q9Y256 329 aa11.52□□□□□ -0.57
VPS33A-202ENST00000451053 M0R3G1 203 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 AKAP8O43823 692 aaKnown RBP11.51□□□□□ -0.57
VPS33A-202ENST00000451053 BCL10O95999 233 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 IFNGP01579 166 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 IGHMP01871 453 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 IGFBP1P08833 259 aaPredicted RBP11.51□□□□□ -0.57
VPS33A-202ENST00000451053 APEHP13798 732 aaKnown RBP11.51□□□□□ -0.57
VPS33A-202ENST00000451053 GRNP28799 593 aaKnown RBP11.51□□□□□ -0.57
VPS33A-202ENST00000451053 EPHA2P29317 976 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 ERVK-25P63136 954 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 IL5RAQ01344 420 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 CAMK2DQ13557 499 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 CLEC12AQ5QGZ9 265 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 TSPO2Q5TGU0 170 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 UBE2J2Q8N2K1 259 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 LNX2Q8N448 690 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 OR8D4Q8NGM9 314 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 ASB10Q8WXI3 467 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 PLEKHA8Q96JA3 519 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 TSPAN32Q96QS1 320 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 KATNB1Q9BVA0 655 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 RBM24Q9BX46 236 aaKnown RBP11.51□□□□□ -0.57
VPS33A-202ENST00000451053 POLDIP3Q9BY77 421 aaKnown RBP11.51□□□□□ -0.57
VPS33A-202ENST00000451053 SLCO5A1Q9H2Y9 848 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 TXNIPQ9H3M7 391 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 SLC7A10Q9NS82 523 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 GALNT8Q9NY28 637 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 PCNX1Q96RV3 2341 aa11.51□□□□□ -0.57
VPS33A-202ENST00000451053 A1L4Q6 167 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 NPIPB13A6NJU9 1138 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 ZNF726A6NNF4 738 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 NPIPB4C9JG80 1138 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 C19orf84I3L1E1 186 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 BHLHE40O14503 412 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 IMPA2O14732 288 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 ARPC3O15145 178 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 SLC43A1O75387 559 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 UPK3AO75631 287 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 PPP1R3DO95685 299 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 CLDN1O95832 211 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 CD14P08571 375 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 GNAO1P09471 354 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 NOS3P29474 1203 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 DAP3P51398 398 aaKnown RBP11.5□□□□□ -0.57
VPS33A-202ENST00000451053 FOXG1P55316 489 aaPredicted RBP11.5□□□□□ -0.57
VPS33A-202ENST00000451053 RPL27P61353 136 aaKnown RBP11.5□□□□□ -0.57
VPS33A-202ENST00000451053 MYBPC1Q00872 1141 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 TEKQ02763 1124 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 RUNX1T1Q06455 604 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 FBXL19-AS1Q494R0 122 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 PHYHD1Q5SRE7 291 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 ARMC4Q5T2S8 1044 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 TMEM236Q5W0B7 351 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 FBXW9Q5XUX1 488 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 GPR139Q6DWJ6 353 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 PTCHD4Q6ZW05 846 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 LINGO2Q7L985 606 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 FAM122BQ7Z309 247 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 GABRG1Q8N1C3 465 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 OR8J1Q8NGP2 316 aa11.5□□□□□ -0.57
VPS33A-202ENST00000451053 OR4Q3Q8NH05 313 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms