RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	IDH3G	P51553	393 aa	Predicted RBP	13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	BID	P55957	195 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	RPS23	P62266	143 aa	Known RBP	13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	GUCY1A3	Q02108	690 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	HIST3H3	Q16695	136 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	HACD2	Q6Y1H2	254 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	NANOGNB	Q7Z5D8	188 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	MDP1	Q86V88	176 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	MICU2	Q8IYU8	434 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	FNDC8	Q8TC99	324 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	C10orf105	Q8TEF2	133 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	TMEM239	Q8WW34	195 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	NEU4	Q8WWR8	484 aa	Predicted RBP	13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	C1orf198	Q9H425	327 aa		13.9	□□□□□ -0.18
SGCE-208	ENST00000450385	IGHV4-30-2	A0A087WSY4	118 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	SLC22A23	A1A5C7	686 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	GMNC	A6NCL1	334 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	INAFM1	C9JVW0	142 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	LRRN3	E7EW58	273 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	C11orf98	E9PRG8	122 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	RAB36	O95755	333 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	UMPS	P11172	480 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	ZNF14	P17017	642 aa	Predicted RBP	13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	FUT1	P19526	365 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	NR4A1	P22736	598 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	CALCR	P30988	508 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	CAPZA2	P47755	286 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	DAP3	P51398	398 aa	Known RBP	13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	RAB1A	P62820	205 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	VLDLR	P98155	873 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	HGFAC	Q04756	655 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	KRTAP1-1	Q07627	177 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	DAG1	Q14118	895 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	CYBRD1	Q53TN4	286 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	PHYHD1	Q5SRE7	291 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	CARD17	Q5XLA6	110 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	SLC46A3	Q7Z3Q1	461 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	RNF113B	Q8IZP6	322 aa	Known RBP	13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	SGTB	Q96EQ0	304 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	ZNF75A	Q96N20	296 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	SEPHS2	Q99611	448 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	DOK1	Q99704	481 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	MEPE	Q9NQ76	525 aa	Predicted RBP	13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	TMEM160	Q9NX00	188 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	MED31	Q9Y3C7	131 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385	CMAHP	Q9Y471	501 aa		13.89	□□□□□ -0.19
SGCE-208	ENST00000450385		A0A096LNT2	108 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	BLOC1S5-TXNDC5	H3BN57	136 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	OR7A10	O76100	309 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	PGA4	P0DJD7	388 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	PGA3	P0DJD8	388 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	CD79A	P11912	226 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	ZNF35	P13682	527 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	PTN	P21246	168 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	LSP1	P33241	339 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	GLRX	P35754	106 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	ZNF133	P52736	654 aa	Predicted RBP	13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	LRFN4	Q6PJG9	635 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	SLC22A24	Q8N4F4	322 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	CMTM5	Q96DZ9	223 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	PRRC1	Q96M27	445 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	MRPL13	Q9BYD1	178 aa	Known RBP	13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	SMURF2	Q9HAU4	748 aa		13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	SON	P18583	2426 aa	Known RBP	13.88	□□□□□ -0.19
SGCE-208	ENST00000450385	DHH	O43323	396 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	HLA-H	P01893	362 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	SERPINA5	P05154	406 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	COX4I1	P13073	169 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	USF1	P22415	310 aa	Predicted RBP	13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	PCSK6	P29122	969 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	THBS4	P35443	961 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	ZNF84	P51523	738 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	TUBA1B	P68363	451 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	TUBA4A	P68366	448 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	GALK2	Q01415	458 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	NPRL3	Q12980	569 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	PIN1	Q13526	163 aa	Predicted RBP	13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	TMEM249	Q2WGJ8	235 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	UGT2A3	Q6UWM9	527 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	TUBA1A	Q71U36	451 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	HIPK1	Q86Z02	1210 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	C1orf174	Q8IYL3	243 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	LRRC17	Q8N6Y2	441 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	ZNF525	Q8N782	197 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	PIMREG	Q9BSJ6	248 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	MS4A5	Q9H3V2	200 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	NOX3	Q9HBY0	568 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385	INIP	Q9NRY2	104 aa		13.87	□□□□□ -0.19
SGCE-208	ENST00000450385		A8MV72	311 aa	Predicted RBP	13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	VWC2L	B2RUY7	222 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	MCIDAS	D6RGH6	385 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	hCG_2039718	K7EN88	272 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	IFNW1	P05000	195 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	QDPR	P09417	244 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	B4GALT1	P15291	398 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	ACADS	P16219	412 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	UGT2B15	P54855	530 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	CLRN1	P58418	232 aa		13.86	□□□□□ -0.19
SGCE-208	ENST00000450385	LSM11	P83369	360 aa	Known RBP eCLIP	13.86	□□□□□ -0.19

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