RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 OR51A2Q8NGJ7 313 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR2AJ1Q8NGZ0 328 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR2T27Q8NH04 317 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR4K15Q8NH41 348 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ABHD4Q8TB40 342 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 FAM213BQ8TBF2 198 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 KTI12Q96EK9 354 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF75AQ96N20 296 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TP53RKQ96S44 253 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SEMA3CQ99985 751 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TMEM100Q9NV29 134 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 VAX2Q9UIW0 290 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TINAGQ9UJW2 476 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 JAG2Q9Y219 1238 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 LSM5Q9Y4Y9 91 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 YIPF1Q9Y548 306 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SNX11Q9Y5W9 270 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ANKRD20A5PA0PJZ0 165 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MTMR11A4FU01 709 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MAP1LC3B2A6NCE7 125 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SERPINE3A8MV23 424 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 KIAA1324LA8MWY0 1029 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 C9JVG2 144 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 FTCDNL1E5RQL4 147 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 LEFTY2O00292 366 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CDIPTO14735 213 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MEIS2O14770 477 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MSTNO14793 375 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR7C2O60412 319 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PAGE1O75459 146 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RAD51DO75771 328 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 APOA2P02652 100 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 LRG1P02750 347 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CD1AP06126 327 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 EIF4EP06730 217 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 RD3LP0DJH9 198 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 USF1P22415 310 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 AK4P27144 223 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 DUSP1P28562 367 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 BCL6P41182 706 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CRYBB2P43320 205 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ARRB1P49407 418 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF140P52738 457 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 FXYD6P3P58550 94 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 HBA1P69905 142 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SP3Q02447 781 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SOX4Q06945 474 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 PMS2P11Q13670 270 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 EIF2B1Q14232 305 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 TARBP2Q15633 366 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 SYPL1Q16563 259 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SGCAQ16586 387 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MEP1BQ16820 701 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TMEM241Q24JQ0 296 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF791Q3KP31 576 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 ALG10Q5BKT4 473 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF805Q5CZA5 627 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PRAMEF19Q5SWL8 479 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TREML2Q5T2D2 321 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF648Q5T619 568 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 WSCD1Q658N2 575 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PRSS54Q6PEW0 395 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 Q6ZN92 141 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 COMMD6Q7Z4G1 85 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 LRRTM1Q86UE6 522 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CATSPERDQ86XM0 798 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 LDLRAD3Q86YD5 345 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CBLN2Q8IUK8 224 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SULF2Q8IWU5 870 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR13C8Q8NGS7 320 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR1P1Q8NH06 330 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SPPL3Q8TCT6 385 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ORAOV1Q8WV07 137 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CDS1Q92903 461 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RAB8BQ92930 207 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DVL3Q92997 716 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 MIB2Q96AX9 1013 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DTD2Q96FN9 168 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SDSLQ96GA7 329 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TMEM19Q96HH6 336 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 FUBP3Q96I24 572 aaKnown RBP eCLIP2.04□□□□□ -2.08
USP53-202ENST00000450251 AKR1E2Q96JD6 320 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SPACA7Q96KW9 195 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TSSK2Q96PF2 358 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ATP5SQ99766 215 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 NRIP2Q9BQI9 281 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 UTP23Q9BRU9 249 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 ALKBH7Q9BT30 221 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 JAM3Q9BX67 310 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 EBPLQ9BY08 206 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC17A9Q9BYT1 436 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 C20orf27Q9GZN8 174 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MAP1LC3BQ9GZQ8 125 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RNF122Q9H9V4 155 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MANBALQ9NQG1 85 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TMPRSS4Q9NRS4 437 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 NAT8Q9UHE5 227 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 AK3Q9UIJ7 227 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TBX21Q9UL17 535 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MRPS33Q9Y291 106 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms