RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 AKR7A3O95154 331 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 UBL3O95164 117 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 IGHV3-13P01766 116 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 KRT16P08779 473 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 RPS2P15880 293 aaKnown RBP6.52□□□□□ -1.37
LINC01961-201ENST00000449954 RBBP4Q09028 425 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 PMS2P3Q13401 168 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 ZMYND11Q15326 602 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 ZMAT1Q5H9K5 638 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 NOXRED1Q6NXP6 359 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 KLC3Q6P597 504 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 EIF3MQ7L2H7 374 aaKnown RBP6.52□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF627Q7L945 461 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 CMC1Q7Z7K0 106 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 CENPLQ8N0S6 344 aaPredicted RBP6.52□□□□□ -1.37
LINC01961-201ENST00000449954 FITM2Q8N6M3 262 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF283Q8N7M2 679 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 PTGR2Q8N8N7 351 aaPredicted RBP6.52□□□□□ -1.37
LINC01961-201ENST00000449954 FAM71CQ8NEG0 241 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 OR2T6Q8NHC8 308 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 OIT3Q8WWZ8 545 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 APIPQ96GX9 242 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 DCLRE1CQ96SD1 692 aaKnown RBP6.52□□□□□ -1.37
LINC01961-201ENST00000449954 NUDT16L1Q9BRJ7 211 aaKnown RBP6.52□□□□□ -1.37
LINC01961-201ENST00000449954 BCL2L14Q9BZR8 327 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 CYSLTR2Q9NS75 346 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 TMEM106BQ9NUM4 274 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 GFOD1Q9NXC2 390 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 TMCO1Q9UM00 188 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 RASD1Q9Y272 281 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 KIAA1109Q2LD37 5005 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 TMED7-TICAM2A0A0A6YYA0 188 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 IGHV1-69DA0A0B4J2H0 117 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 CENPVL1A0A0U1RR11 272 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 CENPVL3A0A0U1RRI6 287 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 LIPT2A6NK58 231 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 NOTOA8MTQ0 251 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 MANBAO00462 879 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 SPRY3O43610 288 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 ENSAO43768 121 aaKnown RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 ANGPTL7O43827 346 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 SNAP29O95721 258 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 IGHV1-69P01742 117 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 IFNW1P05000 195 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 SERPINA5P05154 406 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 HMGN2P05204 90 aaKnown RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 LCKP06239 509 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 CHRM4P08173 479 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 CD55P08174 381 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 WNT2P09544 360 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 MED14OSP0DP75 135 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 SPRP35270 261 aaPredicted RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 LIPAP38571 399 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 KIR2DS4P43632 304 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 GIPRP48546 466 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 POLR2HP52434 150 aaKnown RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 ARL4CP56559 192 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 RAB1AP62820 205 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 LASP1Q14847 261 aaKnown RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 PPP1R7Q15435 360 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF141Q15928 474 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 EMBQ6PCB8 327 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 LCNL1Q6ZST4 164 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 PIWIL3Q7Z3Z3 882 aaKnown RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 RNF130Q86XS8 419 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 PTOV1Q86YD1 416 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 EPHX4Q8IUS5 362 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 LYG1Q8N1E2 194 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 SCCPDHQ8NBX0 429 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 FBXO36Q8NEA4 188 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 PIK3C3Q8NEB9 887 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 OR4C13Q8NGP0 309 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 OR5R1Q8NH85 324 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 IPCEF1Q8WWN9 437 aaPredicted RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 DHRS1Q96LJ7 313 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 C3orf30Q96M34 536 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 PCGF1Q9BSM1 259 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 C1orf198Q9H425 327 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 RANBP3Q9H6Z4 567 aaPredicted RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 ZCCHC3Q9NUD5 404 aaKnown RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 ZMAT5Q9UDW3 170 aaKnown RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 ZDHHC8Q9ULC8 765 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 SLC35A3Q9Y2D2 325 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 CAB39Q9Y376 341 aaPredicted RBP6.51□□□□□ -1.37
LINC01961-201ENST00000449954 TMED7Q9Y3B3 224 aa6.51□□□□□ -1.37
LINC01961-201ENST00000449954 A0A0U1RQK1 487 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 AKAP8O43823 692 aaKnown RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 PIAS1O75925 651 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 MFN2O95140 757 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 RPS17P08708 135 aaKnown RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 FBP1P09467 338 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 CHN1P15882 459 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 CCNA2P20248 432 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 RPL4P36578 427 aaKnown RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 CFHR2P36980 270 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 FRKP42685 505 aaPredicted RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 FNTAP49354 379 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 MMP15P51511 669 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 P2RY4P51582 365 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 GLO1Q04760 184 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms