RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CLUP10909 449 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 SELENOPP49908 381 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 EFNB1P98172 346 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 SF3B4Q15427 424 aaKnown RBP eCLIP12.99□□□□□ -0.33
TNF-208ENST00000449264 KLHL12Q53G59 568 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 GTF2IRD2BQ6EKJ0 949 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 GTF2IRD2Q86UP8 949 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 C9orf106Q8NAJ2 232 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 NOXO1Q8NFA2 376 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 OR6X1Q8NH79 312 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 ZNF566Q969W8 418 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 SLC25A44Q96H78 314 aaPredicted RBP12.99□□□□□ -0.33
TNF-208ENST00000449264 ADAD1Q96M93 576 aaKnown RBP12.99□□□□□ -0.33
TNF-208ENST00000449264 OR51V1Q9H2C8 321 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 RNF122Q9H9V4 155 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 TINAGQ9UJW2 476 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 NOSIPQ9Y314 301 aaKnown RBP12.99□□□□□ -0.33
TNF-208ENST00000449264 CFAP46Q8IYW2 2715 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 PGA4P0DJD7 388 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 PGA3P0DJD8 388 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 PTGER4P35408 488 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 RPS7P62081 194 aaKnown RBP12.99□□□□□ -0.33
TNF-208ENST00000449264 FMODQ06828 376 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 NSUN5P2Q63ZY6 315 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 RTL6Q6ICC9 239 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 AAED1Q7RTV5 226 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 RPRMLQ8N4K4 120 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 FAM26EQ8N5C1 309 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 OR51L1Q8NGJ5 315 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 FBLIM1Q8WUP2 373 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 WNT2BQ93097 391 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
TNF-208ENST00000449264 TSSK2Q96PF2 358 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 OR2M2Q96R28 347 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 KCNK17Q96T54 332 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 TP63Q9H3D4 680 aaPredicted RBP12.99□□□□□ -0.33
TNF-208ENST00000449264 BCO1Q9HAY6 547 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 AMBNQ9NP70 447 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 FAM215AQ9Y5M1 114 aa12.99□□□□□ -0.33
TNF-208ENST00000449264 INTS1Q8N201 2190 aaKnown RBP12.98□□□□□ -0.33
TNF-208ENST00000449264 SLC22A23A1A5C7 686 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 YES1P07947 543 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 AGTR1P30556 359 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 NTF4P34130 210 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 CSNK1A1P48729 337 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 CDH11P55287 796 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 PER3P56645 1201 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 SIRPAP78324 504 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 TMEM201Q5SNT2 666 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 C6orf141Q5SZD1 244 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 NXNL2Q5VZ03 156 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 LAIR2Q6ISS4 152 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 B3GNT6Q6ZMB0 384 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 BPIFB6Q8NFQ5 453 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 OR6N1Q8NGY5 312 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 INTS12Q96CB8 462 aaKnown RBP12.98□□□□□ -0.33
TNF-208ENST00000449264 Q96MT0 163 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 VSX1Q9NZR4 365 aaPredicted RBP12.98□□□□□ -0.33
TNF-208ENST00000449264 H2AFY2Q9P0M6 372 aaPredicted RBP12.98□□□□□ -0.33
TNF-208ENST00000449264 RCE1Q9Y256 329 aa12.98□□□□□ -0.33
TNF-208ENST00000449264 PHF3Q92576 2039 aaKnown RBP12.97□□□□□ -0.33
TNF-208ENST00000449264 CD8B2A6NJW9 211 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 ZNF724A8MTY0 619 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 SLC1A7O00341 560 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 XPNPEP2O43895 674 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 FAM20BO75063 409 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 SLC43A1O75387 559 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 MRPL33O75394 65 aaKnown RBP12.97□□□□□ -0.33
TNF-208ENST00000449264 ZNF432O94892 652 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 SPI1P17947 270 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 PYCR1P32322 319 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 LGALS3BPQ08380 585 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 APOFQ13790 326 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 OCLNQ16625 522 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 AADACL4Q5VUY2 407 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 MEDAGQ5VYS4 303 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 UGT2A3Q6UWM9 527 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 DOLPP1Q86YN1 238 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 GID4Q8IVV7 300 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 TMEM123Q8N131 208 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 CNEP1R1Q8N9A8 125 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 ST6GALNAC3Q8NDV1 305 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 PROKR2Q8NFJ6 384 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 OR6K6Q8NGW6 343 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 PTP4A1Q93096 173 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 TMEM45BQ96B21 275 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 GMPPAQ96IJ6 420 aaPredicted RBP12.97□□□□□ -0.33
TNF-208ENST00000449264 DDOQ99489 341 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 TM9SF2Q99805 663 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 ALG12Q9BV10 488 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 NUAK2Q9H093 628 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 C12orf49Q9H741 205 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 SRA1Q9HD15 236 aaKnown RBP12.97□□□□□ -0.33
TNF-208ENST00000449264 ASB6Q9NWX5 421 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 ZNF835Q9Y2P0 537 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 POLEQ07864 2286 aa12.97□□□□□ -0.33
TNF-208ENST00000449264 M0R3G1 203 aa12.96□□□□□ -0.33
TNF-208ENST00000449264 DCTN6O00399 190 aa12.96□□□□□ -0.33
TNF-208ENST00000449264 PRODHO43272 600 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms