RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PGA3P0DJD8 388 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 MAKP20794 623 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 CALCRP30988 508 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 APOBEC3AP31941 199 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 CSNK1A1P48729 337 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 ZNF133P52736 654 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 IFI44LQ53G44 452 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 ARMC4Q5T2S8 1044 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 GLYATQ6IB77 296 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 BIVMQ86UB2 503 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 MDP1Q86V88 176 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 MUC15Q8N387 334 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 LRRC75AQ8NAA5 344 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 RBM15BQ8NDT2 890 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 OR6N1Q8NGY5 312 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 GEMIN6Q8WXD5 167 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 TRMT61AQ96FX7 289 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 HSH2DQ96JZ2 352 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 CCT8L2Q96SF2 557 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 KCTD14Q9BQ13 255 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 BDH2Q9BUT1 245 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 GORASP2Q9H8Y8 452 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 MOV10Q9HCE1 1003 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 SPAG4Q9NPE6 437 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 DCAF13Q9NV06 445 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 FAIMQ9NVQ4 179 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 FAM53CQ9NYF3 392 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 RHCGQ9UBD6 479 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 GDF2Q9UK05 429 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 MED31Q9Y3C7 131 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 ATP23Q9Y6H3 246 aa12.22□□□□□ -0.45
RTFDC1-204ENST00000449062 ABCA2Q9BZC7 2435 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 NPIPB13A6NJU9 1138 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 NPIPB4C9JG80 1138 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 DYNC1I1O14576 645 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 PIP5K1CO60331 668 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 HLA-HP01893 362 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 HSD17B1P14061 328 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 ARR3P36575 388 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 FABP6P51161 128 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 RIPPLY3P57055 190 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 PRKCDQ05655 676 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 TNK1Q13470 666 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 ZNF813Q6ZN06 617 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 PIWIL3Q7Z3Z3 882 aaKnown RBP12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 NANOGNBQ7Z5D8 188 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 RNF113BQ8IZP6 322 aaKnown RBP12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 RNF148Q8N7C7 305 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 FAM86B1Q8N7N1 296 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 FGFBP3Q8TAT2 258 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 ZNF566Q969W8 418 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 GTPBP3Q969Y2 492 aaKnown RBP12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 BPIFA2Q96DR5 249 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 LRRC37BQ96QE4 947 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 ULBP2Q9BZM5 246 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 NMNAT1Q9HAN9 279 aaPredicted RBP12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 B3GAT2Q9NPZ5 323 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 NDUFAF4Q9P032 175 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 EGFL7Q9UHF1 273 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 TAGLN3Q9UI15 199 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 POU2F3Q9UKI9 436 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 POFUT2Q9Y2G5 429 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 HIF3AQ9Y2N7 669 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 ENPP4Q9Y6X5 453 aa12.21□□□□□ -0.45
RTFDC1-204ENST00000449062 IGHV2OR16-5A0A0B4J2B6 119 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 CENPBD1B2RD01 187 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 DHHO43323 396 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 CRYAAP02489 173 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 UMPSP11172 480 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 ZNF14P17017 642 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 MELKQ14680 651 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 TRAM2Q15035 370 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 ETFDHQ16134 617 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 FKBP9P1Q75LS8 142 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 SKA3Q8IX90 412 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 NRMQ8IXM6 262 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 FBXL14Q8N1E6 418 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 FITM2Q8N6M3 262 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 FAM156AQ8NDB6 213 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 SLC7A13Q8TCU3 470 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 ASB10Q8WXI3 467 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 ACOT11Q8WXI4 607 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 TNFRSF13CQ96RJ3 184 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 CDRT15Q96T59 188 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 FOXB1Q99853 325 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 FUZQ9BT04 418 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 FNDC11Q9BVV2 318 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 INIPQ9NRY2 104 aa12.2□□□□□ -0.46
RTFDC1-204ENST00000449062 H7C417 338 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 PTP4A3O75365 173 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 TRMUO75648 421 aaKnown RBP12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 LY6G6DO95868 133 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 SEMG1P04279 462 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 QDPRP09417 244 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 IFI30P13284 250 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 ZNF35P13682 527 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 B4GALT1P15291 398 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 ACADSP16219 412 aa12.19□□□□□ -0.46
RTFDC1-204ENST00000449062 ZNF26P17031 533 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms