RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 HINT3Q9NQE9 182 aaKnown RBP12.47□□□□□ -0.41
SHMT2-203ENST00000449049 PRSS37A4D1T9 235 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 PGA4P0DJD7 388 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 PGA3P0DJD8 388 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 AGTR1P30556 359 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 TEKQ02763 1124 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 CD47Q08722 323 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 ITGADQ13349 1161 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 MED21Q13503 144 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 TMEM201Q5SNT2 666 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 LEG1Q6P5S2 330 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 B3GNT6Q6ZMB0 384 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 TMEM123Q8N131 208 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 APH1BQ8WW43 257 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF775Q96BV0 537 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-203ENST00000449049 RASSF1Q9NS23 344 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 VSX1Q9NZR4 365 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-203ENST00000449049 CLEC4AQ9UMR7 237 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 NOSIPQ9Y314 301 aaKnown RBP12.47□□□□□ -0.41
SHMT2-203ENST00000449049 OR6C68A6NDL8 312 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF726A6NNF4 738 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 IGHG1P01857 330 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 GSTT1P30711 240 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 TIMP3P35625 211 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 SELENOPP49908 381 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 HIST3H3Q16695 136 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 NIPAL3Q6P499 406 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 AAED1Q7RTV5 226 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 CYB561A3Q8NBI2 242 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 NOXO1Q8NFA2 376 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 ALG12Q9BV10 488 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 NMNAT2Q9BZQ4 307 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 TINAGQ9UJW2 476 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 PIEZO2Q9H5I5 2752 aa12.46□□□□□ -0.41
SHMT2-203ENST00000449049 SHANK1Q9Y566 2161 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 A0A1B0GVG6 124 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 SLC22A23A1A5C7 686 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 PRR23D1E9PI22 279 aaPredicted RBP12.46□□□□□ -0.42
SHMT2-203ENST00000449049 H7C1C5 153 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 WBP4O75554 376 aaKnown RBP12.46□□□□□ -0.42
SHMT2-203ENST00000449049 TOXO94900 526 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 RENP00797 406 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 PRR23D2P0DMB1 279 aaPredicted RBP12.46□□□□□ -0.42
SHMT2-203ENST00000449049 SLC25A1P53007 311 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 LCN6P62502 163 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 CAMK2DQ13557 499 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 OCLNQ16625 522 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 AADACL4Q5VUY2 407 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 LAIR2Q6ISS4 152 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 PLBD1Q6P4A8 553 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 CXXC5Q7LFL8 322 aaKnown RBP12.46□□□□□ -0.42
SHMT2-203ENST00000449049 CPOQ8IVL8 374 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 CNIH3Q8TBE1 160 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 PTP4A1Q93096 173 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 TMEM54Q969K7 222 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 NMD3Q96D46 503 aaKnown RBP12.46□□□□□ -0.42
SHMT2-203ENST00000449049 LRR1Q96L50 414 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 ZFP3Q96NJ6 502 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 PARPBPQ9NWS1 579 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 UBAP1Q9NZ09 502 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 AASSQ9UDR5 926 aa12.46□□□□□ -0.42
SHMT2-203ENST00000449049 TPRP12270 2363 aaKnown RBP12.45□□□□□ -0.42
SHMT2-203ENST00000449049 FAM183AA6NL82 134 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 LYNP07948 512 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 PAICSP22234 425 aaKnown RBP12.45□□□□□ -0.42
SHMT2-203ENST00000449049 CDK5R2Q13319 367 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 EIF2S3LQ2VIR3 472 aaKnown RBP12.45□□□□□ -0.42
SHMT2-203ENST00000449049 MEDAGQ5VYS4 303 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 NXNL2Q5VZ03 156 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 C3P1Q6ZMU1 363 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 FNDC8Q8TC99 324 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 HCAR1Q9BXC0 346 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 SYT4Q9H2B2 425 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 FOXD3Q9UJU5 478 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-203ENST00000449049 PCDHGB5Q9Y5G0 923 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 ARHGAP21Q5T5U3 1957 aa12.45□□□□□ -0.42
SHMT2-203ENST00000449049 SLC43A1O75387 559 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 MRPL33O75394 65 aaKnown RBP12.44□□□□□ -0.42
SHMT2-203ENST00000449049 CRHP06850 196 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 GLI4P10075 376 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 CEACAM8P31997 349 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-203ENST00000449049 CA7P43166 264 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 CLRN1P58418 232 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 CARD17Q5XLA6 110 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 KRT80Q6KB66 452 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 FAM214BQ7L5A3 538 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 NUFIP2Q7Z417 695 aaKnown RBP12.44□□□□□ -0.42
SHMT2-203ENST00000449049 BCDIN3DQ7Z5W3 292 aaKnown RBP12.44□□□□□ -0.42
SHMT2-203ENST00000449049 C20orf196Q8IYI0 205 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 GCNT2Q8N0V5 402 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 SYT14Q8NB59 555 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 BBS1Q8NFJ9 593 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 NBEAQ8NFP9 2946 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 INTS12Q96CB8 462 aaKnown RBP12.44□□□□□ -0.42
SHMT2-203ENST00000449049 MED20Q9H944 212 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 VCX3AQ9NNX9 186 aa12.44□□□□□ -0.42
SHMT2-203ENST00000449049 RPRD1BQ9NQG5 326 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms