RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 NAGAP17050 411 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 MAOAP21397 527 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 PTGS2P35354 604 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 GPR3P46089 330 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 CTXN1P60606 82 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 DPY19L4Q7Z388 723 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 YAF2Q8IY57 180 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 ZNF595Q8IYB9 648 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 AVL9Q8NBF6 648 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 OR2G2Q8NGZ5 317 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 TMEM106AQ96A25 262 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 TSPAN32Q96QS1 320 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 LPAR4Q99677 370 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 SFXN1Q9H9B4 322 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 CPNE7Q9UBL6 633 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 MTFP1Q9UDX5 166 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 ERVK-19Q9WJR5 959 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 HIF3AQ9Y2N7 669 aa12.4□□□□□ -0.42
POLR1B-209ENST00000448770 FXYD6-FXYD2A0A087WZ82 144 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 EFCAB7A8K855 629 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 C2orf74A8MZ97 194 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 GOSR2O14653 212 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 CTAG2O75638 210 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 B3GALNT1O75752 331 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 WNT11O96014 354 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 ITGA5P08648 1049 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 GABRA1P14867 456 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 S100A11P31949 105 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 ZNHIT3Q15649 155 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-209ENST00000448770 ISXQ2M1V0 245 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 KCTD20Q7Z5Y7 419 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 ATG4DQ86TL0 474 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-209ENST00000448770 OR51S1Q8NGJ8 323 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 SLC37A2Q8TED4 501 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 TOE1Q96GM8 510 aaKnown RBP12.39□□□□□ -0.43
POLR1B-209ENST00000448770 RTN4RQ9BZR6 473 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 SHARPINQ9H0F6 387 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 FXYD6Q9H0Q3 95 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 IKZF2Q9UKS7 526 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 TUBAL3A6NHL2 446 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 XRCC3O43542 346 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 CD14P08571 375 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 IFI6P09912 130 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 HOXB2P14652 356 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 NTSR1P30989 418 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 GPM6BQ13491 265 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 ITPRIPL2Q3MIP1 535 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 SLC6A19Q695T7 634 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 METTL27Q8N6F8 245 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-209ENST00000448770 ZNF321PQ8N8H1 164 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 OR2AK2Q8NG84 335 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 OR6N2Q8NGY6 317 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 NSMAFQ92636 917 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 KTI12Q96EK9 354 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-209ENST00000448770 GABRG3Q99928 467 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 ETV7Q9Y603 341 aa12.39□□□□□ -0.43
POLR1B-209ENST00000448770 GGT3PA6NGU5 568 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 A8MXK9 166 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 NUPL2O15504 423 aaKnown RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 GMFGO60234 142 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 ZNF254O75437 659 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 RLN1P04808 185 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 HOXC4P09017 264 aaPredicted RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 LBX1P52954 281 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 SLC25A1P53007 311 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 UBE2IP63279 158 aaKnown RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 MRPS10P82664 201 aaKnown RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 RPL18Q07020 188 aaKnown RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 ALG10Q5BKT4 473 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 FNDC7Q5VTL7 733 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 ZNF660Q6AZW8 331 aaPredicted RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 JAZF1Q86VZ6 243 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 C10orf53Q8N6V4 93 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 OR1S1Q8NH92 325 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 LHFPL5Q8TAF8 219 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 ST8SIA4Q92187 359 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 RELTQ969Z4 430 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 CCDC3Q9BQI4 270 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 ARL6Q9H0F7 186 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 PPA2Q9H2U2 334 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 RABL2AQ9UBK7 228 aaPredicted RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 GPR160Q9UJ42 338 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 KCNG2Q9UJ96 466 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 RABL2BQ9UNT1 228 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 TMEM184BQ9Y519 407 aaPredicted RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 KLF8O95600 359 aaPredicted RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 EGFP01133 1207 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 CD3DP04234 171 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 ANXA2P07355 339 aaKnown RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 ASAH2BP0C7U1 165 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 SDHAP31040 664 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 NUP62P37198 522 aaPredicted RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 CCR4P51679 360 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 RBMS2Q15434 407 aaKnown RBP12.38□□□□□ -0.43
POLR1B-209ENST00000448770 KLHL26Q53HC5 615 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 WDR38Q5JTN6 314 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 ATRAIDQ6UW56 229 aa12.38□□□□□ -0.43
POLR1B-209ENST00000448770 HDDC2Q7Z4H3 204 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms