RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 IDH3AP50213 366 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 BIDP55957 195 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 RPS23P62266 143 aaKnown RBP13.33□□□□□ -0.28
TRA2A-203ENST00000448549 SWT1Q5T5J6 900 aaKnown RBP13.33□□□□□ -0.28
TRA2A-203ENST00000448549 WDR88Q6ZMY6 472 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 GLCCI1Q86VQ1 547 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 ZNF584Q8IVC4 421 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.33□□□□□ -0.28
TRA2A-203ENST00000448549 SMYD1Q8NB12 490 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 BHLHE22Q8NFJ8 381 aaPredicted RBP13.33□□□□□ -0.28
TRA2A-203ENST00000448549 OR5J2Q8NH18 312 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 YIPF5Q969M3 257 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 EBF4Q9BQW3 602 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 RACGAP1Q9H0H5 632 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 METTL17Q9H7H0 456 aaPredicted RBP13.33□□□□□ -0.28
TRA2A-203ENST00000448549 HIF1ANQ9NWT6 349 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
TRA2A-203ENST00000448549 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.28
TRA2A-203ENST00000448549 A0A1W2PPW3 197 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 EVPLLA8MZ36 301 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 FAM157AC9JC47 383 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 M0R3H8 397 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 OR6A2O95222 327 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 VENTXO95231 258 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 MT-ATP6P00846 226 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 SERPINA5P05154 406 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 SAGP10523 405 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-203ENST00000448549 LSP1P33241 339 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 ALKBH6Q3KRA9 238 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 PIWIL3Q7Z3Z3 882 aaKnown RBP13.32□□□□□ -0.28
TRA2A-203ENST00000448549 MEX3DQ86XN8 651 aaKnown RBP13.32□□□□□ -0.28
TRA2A-203ENST00000448549 HIPK4Q8NE63 616 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 TMEM54Q969K7 222 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 TMEM186Q96B77 213 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 C7orf26Q96N11 449 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 MCHR1Q99705 422 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 TMBIM4Q9HC24 238 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 ZNF275Q9NSD4 429 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-203ENST00000448549 GLTPQ9NZD2 209 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 FBXL3Q9UKT7 428 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 CORO2BQ9UQ03 480 aa13.32□□□□□ -0.28
TRA2A-203ENST00000448549 PPIHO43447 177 aaKnown RBP13.31□□□□□ -0.28
TRA2A-203ENST00000448549 NCR1O76036 304 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 TGDSO95455 350 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 MSMBP08118 114 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 TMEM33P57088 247 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 DUSP7Q16829 419 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 AGKQ53H12 422 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 REP15Q6BDI9 236 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 ZNF613Q6PF04 617 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 LRFN4Q6PJG9 635 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 LINC00114Q6XXX2 140 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 SLC35D2Q76EJ3 337 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 SLC22A24Q8N4F4 322 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 OR6X1Q8NH79 312 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 SH3GL3Q99963 347 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 EVA1AQ9H8M9 152 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 SLCO1B3Q9NPD5 702 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 TAS2R5Q9NYW4 299 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 SLC7A8Q9UHI5 535 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 ANGPT4Q9Y264 503 aa13.31□□□□□ -0.28
TRA2A-203ENST00000448549 CPSF4LA6NMK7 179 aaKnown RBP13.3□□□□□ -0.28
TRA2A-203ENST00000448549 CHP2O43745 196 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 FMO6PO60774 539 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 CH25HO95992 272 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 CLPTM1O96005 669 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 TFP02787 698 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 OPN1SWP03999 348 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 OR8G3PP0DMU2 310 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 GAAP10253 952 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 CCL2P13500 99 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 MAGEB1P43366 347 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 MELKQ14680 651 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 NPTX1Q15818 432 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 ZNF74Q16587 644 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 NKPD1Q17RQ9 610 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 DLEU7Q6UYE1 221 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 C12orf54Q6X4T0 127 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 PTOV1Q86YD1 416 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 PAQR4Q8N4S7 273 aaPredicted RBP13.3□□□□□ -0.28
TRA2A-203ENST00000448549 LRRC17Q8N6Y2 441 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 SLC30A7Q8NEW0 376 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 OR6T1Q8NGN1 323 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 ZNF566Q969W8 418 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 ARHGDIGQ99819 225 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 CPPED1Q9BRF8 314 aaPredicted RBP13.3□□□□□ -0.28
TRA2A-203ENST00000448549 CCDC28BQ9BUN5 200 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 OR51B6Q9H340 312 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 TMEM38BQ9NVV0 291 aa13.3□□□□□ -0.28
TRA2A-203ENST00000448549 ZNF346Q9UL40 294 aaKnown RBP13.3□□□□□ -0.28
TRA2A-203ENST00000448549 M0QX08 132 aa13.29□□□□□ -0.28
TRA2A-203ENST00000448549 KPNA4O00629 521 aaPredicted RBP13.29□□□□□ -0.28
TRA2A-203ENST00000448549 RNF13O43567 381 aa13.29□□□□□ -0.28
TRA2A-203ENST00000448549 CDC14BO60729 498 aa13.29□□□□□ -0.28
TRA2A-203ENST00000448549 RP2O75695 350 aa13.29□□□□□ -0.28
TRA2A-203ENST00000448549 RGS9O75916 674 aaPredicted RBP13.29□□□□□ -0.28
TRA2A-203ENST00000448549 LYPD3O95274 346 aa13.29□□□□□ -0.28
TRA2A-203ENST00000448549 THY1P04216 161 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms