RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 GLTPQ9NZD2 209 aa12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 MAGED1Q9Y5V3 778 aaPredicted RBP12.31□□□□□ -0.44
GTF3C3-206ENST00000448539 ABCA12Q86UK0 2595 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 A0A1W2PR80 420 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 A6NIZ1 184 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 DEFB108AA8MXU0 73 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 ZNF99A8MXY4 864 aaPredicted RBP12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 CENPBD1B2RD01 187 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 TRMUO75648 421 aaKnown RBP12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 NR2C1P13056 603 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 FPR3P25089 353 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 RAP1BP61224 184 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 RAP1AP62834 184 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 GK3PQ14409 553 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 TBRG1Q3YBR2 411 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 HIKESHIQ53FT3 197 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 PHYHD1Q5SRE7 291 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 KLHL17Q6TDP4 642 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 ZER1Q7Z7L7 766 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 CDC20BQ86Y33 519 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 NOXO1Q8NFA2 376 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 TMEM54Q969K7 222 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 PLPPR2Q96GM1 343 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 LURAP1Q96LR2 239 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 KATNB1Q9BVA0 655 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 OBP2BQ9NPH6 170 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 GRHPRQ9UBQ7 328 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 ZNF346Q9UL40 294 aaKnown RBP12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 EDARQ9UNE0 448 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 SLC25A15Q9Y619 301 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 U3KQV3 271 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 PDZD2O15018 2839 aa12.3□□□□□ -0.44
GTF3C3-206ENST00000448539 CREBBPQ92793 2442 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 OTOGQ6ZRI0 2925 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 A0A096LPE4 126 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 A0A1W2PPZ6 126 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 XKRYO14609 159 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 KLF4O43474 513 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 FKBP6O75344 327 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 ENTPD5O75356 428 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 PTP4A3O75365 173 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 E2F6O75461 281 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 IGHMP01871 453 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 CD3EP07766 207 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 CD14P08571 375 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 QDPRP09417 244 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 PGA4P0DJD7 388 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 PGA3P0DJD8 388 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 PAX7P23759 505 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 ACVR1BP36896 505 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 KRTAP10-9P60411 292 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 ERVK-25P63136 954 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 CD47Q08722 323 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 PPP1R8Q12972 351 aaKnown RBP12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 FHL1Q13642 323 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 ARMC4Q5T2S8 1044 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 C1orf94Q6P1W5 598 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 SMARCD3Q6STE5 483 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 ZNF813Q6ZN06 617 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 ASRGL1Q7L266 308 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 WDFY1Q8IWB7 410 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 WDR31Q8NA23 367 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 LRRC75AQ8NAA5 344 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 SYT14Q8NB59 555 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 OR4C15Q8NGM1 316 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 FANK1Q8TC84 345 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 FNDC8Q8TC99 324 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 MAGEE2Q8TD90 523 aaPredicted RBP12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 BCL2L2Q92843 193 aaPredicted RBP12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 BOD1Q96IK1 185 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 RBP7Q96R05 134 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 FOXB1Q99853 325 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 SIGLEC7Q9Y286 467 aa12.29□□□□□ -0.44
GTF3C3-206ENST00000448539 M0R1B8 84 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 SIAH2O43255 324 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 DHHO43323 396 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 CAPZA2P47755 286 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 ZNF83P51522 516 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 ZNF84P51523 738 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 RPS6KA3P51812 740 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 MYBPC1Q00872 1141 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 RUNX1T1Q06455 604 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 TSPAN31Q12999 210 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 MICAQ29983 383 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 NCMAPQ5T1S8 102 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 PGBD2Q6P3X8 592 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 TMEM108Q6UXF1 575 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 DPY19L2P2Q6ZN68 376 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 CCDC36Q8IYA8 594 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 ARIH2OSQ8N7S6 290 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 OR9Q2Q8NGE9 314 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 NANOS1Q8WY41 292 aaKnown RBP12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 MCHR2Q969V1 340 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 ZNF837Q96EG3 531 aaPredicted RBP12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 ZNF570Q96NI8 536 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 TSPAN32Q96QS1 320 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 GPA33Q99795 319 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 ALG12Q9BV10 488 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms