RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ZNF770Q6IQ21 691 aaPredicted RBP12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 PGBD2Q6P3X8 592 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 SHQ1Q6PI26 577 aaKnown RBP12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 SEZ6L2Q6UXD5 910 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 DNM1P46Q6ZS02 220 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 ZER1Q7Z7L7 766 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 HIPK1Q86Z02 1210 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 AQP11Q8NBQ7 271 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 MAPK1IP1LQ8NDC0 245 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 KBTBD8Q8NFY9 601 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 OR5K1Q8NHB7 308 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 STK35Q8TDR2 534 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 GIPC3Q8TF64 312 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 DDIT4LQ96D03 193 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 SGTBQ96EQ0 304 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 CIB1Q99828 191 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 RHNO1Q9BSD3 238 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 SMURF2Q9HAU4 748 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 RNPEPL1Q9HAU8 725 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 EMC3Q9P0I2 261 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 PRSS50Q9UI38 385 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 OAZ3Q9UMX2 235 aa12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 SPIN1Q9Y657 262 aaPredicted RBP12.08□□□□□ -0.48
PDLIM2-213ENST00000448520 TRAV36DV7A0A075B6V5 113 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 LIPT2A6NK58 231 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 OR5H1A6NKK0 313 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 FTCDNL1E5RQL4 147 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 CDC42EP2O14613 210 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 GPR171O14626 319 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 SMAD9O15198 467 aaKnown RBP12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 GASTP01350 101 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 COX5AP20674 150 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 IGHV1-2P23083 117 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 PEX2P28328 305 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 CLK1P49759 484 aaKnown RBP12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 DIO1P49895 249 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 OR2B6P58173 313 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 PRKCDQ05655 676 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 ZNF74Q16587 644 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 LRRC36Q1X8D7 754 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 FBXW9Q5XUX1 488 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 ZNF433Q8N7K0 673 aaPredicted RBP12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 OR13C2Q8NGS9 318 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 PIGXQ8TBF5 258 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 ZNF775Q96BV0 537 aaPredicted RBP12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 BPIFA2Q96DR5 249 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 ZHX1-C8orf76Q96EF9 292 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 ADAD1Q96M93 576 aaKnown RBP12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 NIPSNAP1Q9BPW8 284 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 DCLRE1BQ9H816 532 aa12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 STX18Q9P2W9 335 aaKnown RBP12.07□□□□□ -0.48
PDLIM2-213ENST00000448520 IGKV3D-15A0A087WSY6 115 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 CIB4A0PJX0 185 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 G3V2T6 193 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 ABCD4O14678 606 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 DNPH1O43598 174 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 RAMP1O60894 148 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 OR7A10O76100 309 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 AKR7A3O95154 331 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 IGHV4-39P01824 125 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 PTAFRP25105 342 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 GRPRP30550 384 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 DSCR9P59020 149 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 TRIP10Q15642 601 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 KLHL17Q6TDP4 642 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 TMEM108Q6UXF1 575 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 RRM2BQ7LG56 351 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 DEPDC4Q8N2C3 294 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 NRG4Q8WWG1 115 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 FEVQ99581 238 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 SLC29A1Q99808 456 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 PRDM4Q9UKN5 801 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 B3GALT5Q9Y2C3 310 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 NOSIPQ9Y314 301 aaKnown RBP12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 HDGFL3Q9Y3E1 203 aa12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 YLPM1P49750 1951 aaKnown RBP12.06□□□□□ -0.48
PDLIM2-213ENST00000448520 TRAV27A0A087WT01 109 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 EFCAB9A8MZ26 197 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 M0R082 166 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 SOCS2O14508 198 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 MITFO75030 526 aaPredicted RBP12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 PMS2P2O95744 297 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 IGFBP1P08833 259 aaPredicted RBP12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 TTKP33981 857 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 DAPP51397 102 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 CDH11P55287 796 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 RIPK1Q13546 671 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 C1QTNF12Q5T7M4 302 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 FAM69AQ5T7M9 428 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 OR7E24Q6IFN5 339 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 RNF113BQ8IZP6 322 aaKnown RBP12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 UBE2J2Q8N2K1 259 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 CBR4Q8N4T8 237 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 TMEM99Q8N816 258 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 MFSD8Q8NHS3 518 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 ZNF417Q8TAU3 575 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 APH1AQ96BI3 265 aa12.05□□□□□ -0.48
PDLIM2-213ENST00000448520 ZNF587Q96SQ5 575 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms