RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CTLA4P16410 223 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 POU4F2Q12837 409 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SLC36A2Q495M3 483 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SFRP4Q6FHJ7 346 aaPredicted RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 SLC29A4Q7RTT9 530 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 FAM109AQ8N4B1 249 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SPEM1Q8N4L4 309 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 ADAMTS18Q8TE60 1221 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 ADAM19Q9H013 955 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SMOC1Q9H4F8 434 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 NARFLQ9H6Q4 476 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 FLVCR2Q9UPI3 526 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 MRPS17Q9Y2R5 130 aaKnown RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 PCDHGB7Q9Y5F8 929 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 TMED7-TICAM2A0A0A6YYA0 188 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 INMT-MINDY4F8WBC2 141 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SLC19A2O60779 497 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 UCHL1P09936 223 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 ARSBP15848 533 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 NUDT1P36639 197 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 TAS2R43P59537 309 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 ACTA2P62736 377 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 ACTG2P63267 376 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 CCL7P80098 99 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 GGTLC2Q14390 218 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 LPAL2Q16609 132 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 RPL22L1Q6P5R6 122 aaKnown RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 MAFAQ8NHW3 353 aaPredicted RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 DAZLQ92904 295 aaKnown RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 OR1F2PQ96R84 312 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 EMC6Q9BV81 110 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SEMA4CQ9C0C4 833 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 LIN7BQ9HAP6 207 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 MED29Q9NX70 200 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 TMED7Q9Y3B3 224 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 CFAP47Q6ZTR5 3102 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 PHF3Q92576 2039 aaKnown RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SIGLEC6O43699 453 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SLC25A12O75746 678 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 HLA-DQB1P01920 261 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 BGLAPP02818 100 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SPARCP09486 303 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 STARD6P59095 220 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 RNF4P78317 190 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 NTRK2Q16620 822 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 CORO6Q6QEF8 472 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 GLRX5Q86SX6 157 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 MS4A15Q8N5U1 240 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 APCDD1LQ8NCL9 501 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 METTL21AQ8WXB1 218 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 YIPF5Q969M3 257 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 KIAA1143Q96AT1 154 aaPredicted RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 DACT3Q96B18 629 aaPredicted RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 ZNF578Q96N58 590 aaPredicted RBP13.37□□□□□ -0.27
SF1-211ENST00000448404 KLK11Q9UBX7 282 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 KCNN3Q9UGI6 736 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SUSD2Q9UGT4 822 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 MMACHCQ9Y4U1 282 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 MEIS3P1A6NDR6 274 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 ZNF879B4DU55 563 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 PNPP00491 289 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 KLK2P20151 261 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 ARRB1P49407 418 aaPredicted RBP13.36□□□□□ -0.27
SF1-211ENST00000448404 INSM1Q01101 510 aaPredicted RBP13.36□□□□□ -0.27
SF1-211ENST00000448404 DMRTC1Q5HYR2 192 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 ZNF684Q5T5D7 378 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 LINGO2Q7L985 606 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 LINC00346Q8IVM7 164 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 PRSS35Q8N3Z0 413 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 LAT2Q9GZY6 243 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 CHRDQ9H2X0 955 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 RABL2BQ9UNT1 228 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 COLQQ9Y215 455 aaPredicted RBP13.36□□□□□ -0.27
SF1-211ENST00000448404 A0A0A6YYJ9 748 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 ADAM10O14672 748 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 ZNF780AO75290 641 aaPredicted RBP13.36□□□□□ -0.27
SF1-211ENST00000448404 IFI6P09912 130 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 GP1BBP13224 206 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 BIKQ13323 160 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 SF3A2Q15428 464 aaKnown RBP13.36□□□□□ -0.27
SF1-211ENST00000448404 OR7E24Q6IFN5 339 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 SYS1Q8N2H4 156 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 NSMAFQ92636 917 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 SLC25A38Q96DW6 304 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 MSANTD3Q96H12 275 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 CCDC120Q96HB5 630 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 OCIAD1Q9NX40 245 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 ADAMTS9Q9P2N4 1935 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 ADAM30Q9UKF2 790 aa13.36□□□□□ -0.27
SF1-211ENST00000448404 LOC101059948A0A1B0GTJ6 334 aa13.35□□□□□ -0.27
SF1-211ENST00000448404 ALG1L2C9J202 215 aa13.35□□□□□ -0.27
SF1-211ENST00000448404 ZNF593O00488 134 aaPredicted RBP13.35□□□□□ -0.27
SF1-211ENST00000448404 GMDSO60547 372 aa13.35□□□□□ -0.27
SF1-211ENST00000448404 EIF1AXP47813 144 aaKnown RBP13.35□□□□□ -0.27
SF1-211ENST00000448404 FAM205BPQ63HN1 556 aa13.35□□□□□ -0.27
SF1-211ENST00000448404 MZT2BQ6NZ67 158 aa13.35□□□□□ -0.27
SF1-211ENST00000448404 GLB1L2Q8IW92 636 aa13.35□□□□□ -0.27
SF1-211ENST00000448404 DNASE2BQ8WZ79 361 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms