RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 KRT80Q6KB66 452 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 LRFN4Q6PJG9 635 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SPATA21Q7Z572 469 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 CARM1Q86X55 608 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SNX32Q86XE0 403 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 CDK20Q8IZL9 346 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ZCCHC24Q8N2G6 241 aaKnown RBP13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 FGFBP3Q8TAT2 258 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ZNF583Q96ND8 569 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SAR1AQ9NR31 198 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 GLTPQ9NZD2 209 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 CDC42EP3Q9UKI2 254 aa13.68□□□□□ -0.22
SPTLC1P1-201ENST00000447199 RNF13O43567 381 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 OR6A2O95222 327 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 FAM157CP0CG43 387 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PGA4P0DJD7 388 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PGA3P0DJD8 388 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 TNFRSF1BP20333 461 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 GIFP27352 417 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 GIPRP48546 466 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 RAB1AP62820 205 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PIGFQ07326 219 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 GGTLC2Q14390 218 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 FXNQ16595 210 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 REP15Q6BDI9 236 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PODNL1Q6PEZ8 512 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PIWIL3Q7Z3Z3 882 aaKnown RBP13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ZNF584Q8IVC4 421 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SKA3Q8IX90 412 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SPATA3Q8NHX4 192 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SLC26A7Q8TE54 656 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SEPHS2Q99611 448 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SH3GL1Q99961 368 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 BPESC1Q9GZL8 116 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 RAB1BQ9H0U4 201 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 MRGBPQ9NV56 204 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ANK2Q01484 3957 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 BBIP1A8MTZ0 92 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 VSTM5A8MXK1 200 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 MRASO14807 208 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 UBL3O95164 117 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 STAMBPO95630 424 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 IGF2P01344 180 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 MT-ND1P03886 318 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 TSPAN19P0C672 248 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 RBM34P42696 430 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 EVX1P49640 407 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 GZMKP49863 264 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 UGT2B15P54855 530 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 MELKQ14680 651 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 HIST3H3Q16695 136 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 NKAIN4Q8IVV8 208 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SLC22A24Q8N4F4 322 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 NEU4Q8WWR8 484 aaPredicted RBP13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ZNF566Q969W8 418 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 MRPL24Q96A35 216 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 MSI2Q96DH6 328 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 KCNK17Q96T54 332 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ECSITQ9BQ95 431 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 MRPL37Q9BZE1 423 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 POLR2J2Q9GZM3 115 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 FGFR1OP2Q9NVK5 253 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 BAG5Q9UL15 447 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SH3GLB1Q9Y371 365 aa13.66□□□□□ -0.22
SPTLC1P1-201ENST00000447199 HAX1O00165 279 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 OR5F1O95221 314 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 IFNA2P01563 188 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PATE4P0C8F1 98 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 TROVE2P10155 538 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 DAOP14920 347 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ZNF23P17027 643 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 GLRXP35754 106 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PTDSS1P48651 473 aaKnown RBP13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ARFIP2P53365 341 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 RUNX1T1Q06455 604 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 RPL18Q07020 188 aaKnown RBP13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 RAB39AQ14964 217 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 CARTPTQ16568 116 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ERICH5Q6P6B1 374 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ZNF786Q8N393 782 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 ZNF540Q8NDQ6 660 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PFN4Q8NHR9 129 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 SOX7Q9BT81 388 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 MRPL13Q9BYD1 178 aaKnown RBP13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 TMEM38BQ9NVV0 291 aa13.65□□□□□ -0.22
SPTLC1P1-201ENST00000447199 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 DHHO43323 396 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SYNGR3O43761 229 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LMX1BO60663 402 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 RAB36O95755 333 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 BCL10O95999 233 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 HIST1H2ABP04908 130 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SERPINA5P05154 406 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ADRA2AP08913 450 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms