RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 RAB33AQ14088 237 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 MLF2Q15773 248 aaPredicted RBP12.71□□□□□ -0.37
VPS52-212ENST00000445902 ZIC1Q15915 447 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 PRAMEF17Q5VTA0 474 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 LIPNQ5VXI9 398 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 MTSS1LQ765P7 747 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 DEFB128Q7Z7B8 93 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 NRROSQ86YC3 692 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 TMEFF1Q8IYR6 380 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 OR4A4PQ8NGN8 299 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 OR6S1Q8NH40 331 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 PHOSPHO1Q8TCT1 267 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 TMED6Q8WW62 240 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 TAS2R8Q9NYW2 309 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 IKZF2Q9UKS7 526 aa12.71□□□□□ -0.37
VPS52-212ENST00000445902 TBC1D3KA0A087X1G2 549 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 TBC1D3BA6NDS4 549 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 TBC1D3FA6NER0 549 aaPredicted RBP12.71□□□□□ -0.38
VPS52-212ENST00000445902 EEF1E1-BLOC1S5C9J1V9 151 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 EFEMP2O95967 443 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 ITGB2P05107 769 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 DBIP07108 87 aaKnown RBP12.71□□□□□ -0.38
VPS52-212ENST00000445902 ZNF28P17035 718 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 DCDP81605 110 aaKnown RBP12.71□□□□□ -0.38
VPS52-212ENST00000445902 MESP2Q0VG99 397 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 HABP2Q14520 560 aaPredicted RBP12.71□□□□□ -0.38
VPS52-212ENST00000445902 ALG10BQ5I7T1 473 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 ARHGAP40Q5TG30 622 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 TBC1D3GQ6DHY5 549 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 TMEM205Q6UW68 189 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 ACOT7LQ6ZUV0 252 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 ZNF627Q7L945 461 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 CLEC1AQ8NC01 280 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 OR1J4Q8NGS1 313 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 CXorf40AQ8TE69 158 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 CCDC107Q8WV48 283 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 TCEAL3Q969E4 200 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 C3orf49Q96BT1 292 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 TMEM74BQ9NUR3 256 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 MBD2Q9UBB5 411 aa12.71□□□□□ -0.38
VPS52-212ENST00000445902 A0A0B4J2A0 478 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 ZNF860A6NHJ4 632 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 SULT2B1O00204 365 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 AVPR2P30518 371 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 EXOSC7Q15024 291 aaKnown RBP12.7□□□□□ -0.38
VPS52-212ENST00000445902 ATPAF1Q5TC12 328 aaPredicted RBP12.7□□□□□ -0.38
VPS52-212ENST00000445902 ENPP7Q6UWV6 458 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 DNM1P46Q6ZS02 220 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 FAM219AQ8IW50 185 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 CASTOR1Q8WTX7 329 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 C15orf40Q8WUR7 153 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 PHYHIPQ92561 330 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 INSM2Q96T92 566 aaPredicted RBP12.7□□□□□ -0.38
VPS52-212ENST00000445902 SELENOIQ9C0D9 397 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 ZNF350Q9GZX5 532 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 SHPKQ9UHJ6 478 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 TVP23AA6NH52 213 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 CCL16O15467 120 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 CD8AP01732 235 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 LRG1P02750 347 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 PPT1P50897 306 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 NR0B1P51843 470 aaKnown RBP12.7□□□□□ -0.38
VPS52-212ENST00000445902 ANKRD16Q6P6B7 361 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 TRIM43Q96BQ3 446 aaPredicted RBP12.7□□□□□ -0.38
VPS52-212ENST00000445902 KLF15Q9UIH9 416 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 KCNK6Q9Y257 313 aa12.7□□□□□ -0.38
VPS52-212ENST00000445902 TTLL8A6PVC2 850 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 HOXA2O43364 376 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 NDUFB2O95178 105 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 WNT11O96014 354 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 DCNP07585 359 aaKnown RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 THBS1P07996 1170 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ITGA5P08648 1049 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ZNF888P0CJ79 500 aaPredicted RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 PGAM2P15259 253 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 CD96P40200 585 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 EMDP50402 254 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 SMCO1Q147U7 214 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 TGIF1Q15583 401 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 METRNLQ641Q3 311 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 KCTD9Q7L273 389 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 CD163Q86VB7 1156 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ZNF676Q8N7Q3 588 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 INO80EQ8NBZ0 244 aaPredicted RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 NPEPL1Q8NDH3 523 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ADAD1Q96M93 576 aaKnown RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 HRH4Q9H3N8 390 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 MIOXQ9UGB7 285 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 HCFC2Q9Y5Z7 792 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 UNC80Q8N2C7 3258 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 LRRC72A6NJI9 287 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 TXNL1O43396 289 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 LDB3O75112 727 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 S100A6P06703 90 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ZNF157P51786 506 aaPredicted RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 PRKXP51817 358 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 GGTLC2Q14390 218 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ZNF345Q14585 488 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms