RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 PTDSS2Q9BVG9 487 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 FAM60AQ9NP50 221 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 DTX4Q9Y2E6 619 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 A0A087WV48 116 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 FITM1A5D6W6 292 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 CD3DP04234 171 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 RBM34P42696 430 aaKnown RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 RIN1Q13671 783 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 FAM74A1Q5RGS3 127 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 WBP2NLQ6ICG8 309 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 RAB12Q6IQ22 244 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 TMEM205Q6UW68 189 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 TMEM184AQ6ZMB5 413 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 TMPRSS9Q7Z410 1059 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 ZNF584Q8IVC4 421 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 BCORP1Q8N888 145 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 ZNRF4Q8WWF5 429 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 SORCS2Q96PQ0 1159 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 RBP7Q96R05 134 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 MAP3K3Q99759 626 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 A0A1B0GUH1 482 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 PTP4A3O75365 173 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 SEMA4FO95754 770 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 OPN1LWP04000 364 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 CTSBP07858 339 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 CSF1P09603 554 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 FAM157BP0CG42 384 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 MRPS10P82664 201 aaKnown RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 PSG6Q00889 435 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 TMEM255AQ5JRV8 349 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 C1orf189Q5VU69 101 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 FAM109BQ6ICB4 259 aaPredicted RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 TMEM151BQ8IW70 566 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 INO80EQ8NBZ0 244 aaPredicted RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 OR13C3Q8NGS6 347 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 SLC25A44Q96H78 314 aaPredicted RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 CXorf58Q96LI9 332 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 MOGAT1Q96PD6 335 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 MS4A7Q9GZW8 240 aaPredicted RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 C2orf42Q9NWW7 574 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 TAS2R8Q9NYW2 309 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 KCNG2Q9UJ96 466 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 FOXJ3Q9UPW0 622 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 THSD7BQ9C0I4 1608 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 MKI67P46013 3256 aaKnown RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 HELZP42694 1942 aaKnown RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 ATP6V1G2-DDX39BF2Z307 99 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 OGG1O15527 345 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 PLRG1O43660 514 aaKnown RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 CELA2BP08218 269 aaPredicted RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 CD34P28906 385 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 LSSP48449 732 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 MAP2K6P52564 334 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 RIDAP52758 137 aaKnown RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 EIF2B1Q14232 305 aaKnown RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 KLHL24Q6TFL4 600 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 SLC16A9Q7RTY1 509 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 C12orf45Q8N5I9 185 aaPredicted RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 DPYSL5Q9BPU6 564 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 ZNF649Q9BS31 505 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 SLCO1C1Q9NYB5 712 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 RTTNQ86VV8 2226 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 ARHGEF17Q96PE2 2063 aaPredicted RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 NOTCH4Q99466 2003 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 TCRBV16S1A1N1A0A5B0 115 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 SDC3O75056 442 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 NKX2-2O95096 273 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 AHSA1O95433 338 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 PNMTP11086 282 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 MELKQ14680 651 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 STEAP1BQ6NZ63 245 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 KCTD18Q6PI47 426 aaPredicted RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 CBLN3Q6UW01 205 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 OR11G2Q8NGC1 345 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 THAP6Q8TBB0 222 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 FGF11Q92914 225 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 FAM3DQ96BQ1 224 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 UBQLN4Q9NRR5 601 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 FRMPD3Q5JV73 1810 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 IGKV1D-16P01601 117 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 GIPP09681 153 aaPredicted RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 COL9A1P20849 921 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 CXADRP78310 365 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 RPL18Q07020 188 aaKnown RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 CDONQ4KMG0 1287 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 GLYATL3Q5SZD4 288 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 SLC18B1Q6NT16 456 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 PWWP2BQ6NUJ5 590 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 GLDNQ6ZMI3 551 aaPredicted RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 DND1Q8IYX4 353 aaKnown RBP10.82□□□□□ -0.68
MSH6-204ENST00000445503 NPEPL1Q8NDH3 523 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 ST8SIA4Q92187 359 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 PPP1R14AQ96A00 147 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 SLC6A15Q9H2J7 730 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 OR2S2Q9NQN1 319 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 SLC39A1Q9NY26 324 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 TAS2R5Q9NYW4 299 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 PIAS3Q9Y6X2 628 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 PLXNB3Q9ULL4 1909 aa10.82□□□□□ -0.68
MSH6-204ENST00000445503 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms