RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 ZNF385AQ96PM9 386 aaKnown RBP4.37□□□□□ -1.71
CBX1-204ENST00000444685 TSSK3Q96PN8 268 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 ALKBH3Q96Q83 286 aaPredicted RBP4.37□□□□□ -1.71
CBX1-204ENST00000444685 OR7D2Q96RA2 312 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 KCNA7Q96RP8 456 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 CCT7Q99832 543 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 RBM4BQ9BQ04 359 aaKnown RBP4.37□□□□□ -1.71
CBX1-204ENST00000444685 ADI1Q9BV57 179 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 RSPO3Q9BXY4 272 aaPredicted RBP4.37□□□□□ -1.71
CBX1-204ENST00000444685 LINC00470Q9BZP3 86 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 DPY30Q9C005 99 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 EGLN1Q9GZT9 426 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 LRMDAQ9H2I8 198 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 DENND2DQ9H6A0 471 aaPredicted RBP4.37□□□□□ -1.71
CBX1-204ENST00000444685 NOX3Q9HBY0 568 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 B3GAT2Q9NPZ5 323 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 TAAR3PQ9P1P4 343 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 ZNF69Q9UC07 566 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 BAIAP2L1Q9UHR4 511 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 ATP6V1HQ9UI12 483 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 MKLN1Q9UL63 735 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 RASD1Q9Y272 281 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 TMED5Q9Y3A6 229 aa4.37□□□□□ -1.71
CBX1-204ENST00000444685 NUP214P35658 2090 aaPredicted RBP4.37□□□□□ -1.71
CBX1-204ENST00000444685 PLSCR5A0PG75 271 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 CLPSL1A2RUU4 121 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 LIPT2A6NK58 231 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 AQP7P3A6NL99 342 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 C17orf100A8MU93 164 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 TRIM49D1C9J1S8 452 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 POC1B-GALNT4F8VUJ3 575 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 RPL36A-HNRNPH2H7BZ11 118 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 AKAP8O43823 692 aaKnown RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 FCMRO60667 390 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 ERLIN1O75477 346 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 UPK3AO75631 287 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 UGT2B17O75795 530 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SEC14L2O76054 403 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 LCKP06239 509 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 CHRM4P08173 479 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SNRPAP09012 282 aaKnown RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 MYZAPP0CAP1 466 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 ZNF35P13682 527 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 TACR3P29371 465 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 PGM1P36871 562 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 MAGEB1P43366 347 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 PTDSS1P48651 473 aaKnown RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 RAG2P55895 527 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 CLDN17P56750 224 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 KLF3P57682 345 aaPredicted RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 LOXL3P58215 753 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 RAB1AP62820 205 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 MRPS25P82663 173 aaKnown RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 CD69Q07108 199 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 PIGFQ07326 219 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SRSF4Q08170 494 aaKnown RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 ZNF154Q13106 437 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 MAD2L1BPQ15013 274 aaPredicted RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 CNN3Q15417 329 aaKnown RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 FAM189A2Q15884 450 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 C2orf68Q2NKX9 166 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 ALKBH6Q3KRA9 238 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 VAX1Q5SQQ9 334 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 BTNL3Q6UXE8 466 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 UNQ6126/PRO20091Q6UXV3 157 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 ETV3LQ6ZN32 361 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 ZNF771Q7L3S4 317 aaPredicted RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 C6orf120Q7Z4R8 191 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 BCL6BQ8N143 479 aaPredicted RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 PIK3C3Q8NEB9 887 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 CLHC1Q8NHS4 586 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 FAM110DQ8TAY7 271 aaPredicted RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 SYNPRQ8TBG9 265 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SFXN5Q8TD22 340 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SLC25A36Q96CQ1 311 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 TRIM44Q96DX7 344 aaPredicted RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 L3HYPDHQ96EM0 354 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 ELMOD3Q96FG2 381 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 TMEM237Q96Q45 408 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 CITED1Q99966 193 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 TSPYL1Q9H0U9 437 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 NANOGQ9H9S0 305 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SAP30LQ9HAJ7 183 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 GPR35Q9HC97 309 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 EXOSC3Q9NQT5 275 aaKnown RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 POLE3Q9NRF9 147 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 TNFRSF19Q9NS68 423 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 NKIRAS2Q9NYR9 191 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 KIF17Q9P2E2 1029 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SEC14L4Q9UDX3 406 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 DCDC2Q9UHG0 476 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SLC7A8Q9UHI5 535 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 OPN4Q9UHM6 478 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 SCOCQ9UIL1 159 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 PURGQ9UJV8 347 aaKnown RBP4.36□□□□□ -1.71
CBX1-204ENST00000444685 OSGIN1Q9UJX0 560 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 FZR1Q9UM11 496 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 POFUT2Q9Y2G5 429 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 WDR45Q9Y484 360 aa4.36□□□□□ -1.71
CBX1-204ENST00000444685 WIPI2Q9Y4P8 454 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms