RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 VSTM5A8MXK1 200 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 NPIPB4C9JG80 1138 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 SMAD7O15105 426 aaKnown RBP16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 GSTA4O15217 222 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 PGA4P0DJD7 388 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 PGA3P0DJD8 388 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 HOXB4P17483 251 aaPredicted RBP16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 DRD4P21917 467 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 SERPINF1P36955 418 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 CAPZA2P47755 286 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 IDH3GP51553 393 aaPredicted RBP16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 RPL18Q07020 188 aaKnown RBP16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 EFNB3Q15768 340 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 HIST3H3Q16695 136 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 GSG1Q2KHT4 349 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 MST1LQ2TV78 715 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 NRN1LQ496H8 165 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 MDP1Q86V88 176 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 OFCC1Q8IZS5 231 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 PFN4Q8NHR9 129 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 GEMIN6Q8WXD5 167 aaKnown RBP16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 ZNF442Q9H7R0 627 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 SPAG4Q9NPE6 437 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 CSPG4Q6UVK1 2322 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 B9A039 149 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 MGRN1O60291 552 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 SEC14L2O76054 403 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 IGHG1P01857 330 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 B4GALT1P15291 398 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 CALCRP30988 508 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 DAP3P51398 398 aaKnown RBP16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 NUDT6P53370 316 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 PSME3P61289 254 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 IFI44LQ53G44 452 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 LRFN4Q6PJG9 635 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 VTCN1Q7Z7D3 282 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 KCTD14Q9BQ13 255 aaPredicted RBP16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 MRPL13Q9BYD1 178 aaKnown RBP16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 REG4Q9BYZ8 158 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 FAM107BQ9H098 131 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 INIPQ9NRY2 104 aa16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 GMPR2Q9P2T1 348 aaKnown RBP16.34■□□□□ 0.21
ATPAF2-201ENST00000444058 TLN2Q9Y4G6 2542 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 IGHV2OR16-5A0A0B4J2B6 119 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 DHHO43323 396 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 SSX4O60224 188 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 UBL3O95164 117 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 ZNF682O95780 498 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 HLA-HP01893 362 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 CELA3BP08861 270 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 OR8G3PP0DMU2 310 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 EFNA4P52798 201 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 SNRPD2P62316 118 aaKnown RBP16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 HGFACQ04756 655 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 NPRL3Q12980 569 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 TRAM2Q15035 370 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 ADIPOQQ15848 244 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 ANKDD1AQ495B1 522 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 DPPA2Q7Z7J5 298 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 RNF113BQ8IZP6 322 aaKnown RBP16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 OR10H5Q8NGA6 315 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 BPIFA2Q96DR5 249 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 ZNF75AQ96N20 296 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 RHNO1Q9BSD3 238 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 FNDC11Q9BVV2 318 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 SEC61A2Q9H9S3 476 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 MAN2C1Q9NTJ4 1040 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 TMEM38BQ9NVV0 291 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 ZNF224Q9NZL3 707 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 HIF3AQ9Y2N7 669 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 SNX13Q9Y5W8 968 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 NAV3Q8IVL0 2385 aa16.33■□□□□ 0.2
ATPAF2-201ENST00000444058 RNF223E7ERA6 249 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 FFAR1O14842 300 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 SERPINA1P01009 418 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 F13BP05160 661 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 OR4A8P0C604 315 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 ZNF14P17017 642 aaPredicted RBP16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 AQP2P41181 271 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 ZNF133P52736 654 aaPredicted RBP16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 MELKQ14680 651 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 TAF11Q15544 211 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 Q71RC1 249 aaPredicted RBP16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 FKBP9P1Q75LS8 142 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 MYPOPQ86VE0 399 aaPredicted RBP16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 SLC22A24Q8N4F4 322 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 ASB10Q8WXI3 467 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 FBXO17Q96EF6 278 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 HSH2DQ96JZ2 352 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 ANKRD19PQ9H560 264 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 RPS6KA6Q9UK32 745 aa16.32■□□□□ 0.2
ATPAF2-201ENST00000444058 HIVEP2P31629 2446 aa16.31■□□□□ 0.2
ATPAF2-201ENST00000444058 MCIDASD6RGH6 385 aa16.31■□□□□ 0.2
ATPAF2-201ENST00000444058 PRSS23O95084 383 aa16.31■□□□□ 0.2
ATPAF2-201ENST00000444058 FARS2O95363 451 aaKnown RBP16.31■□□□□ 0.2
ATPAF2-201ENST00000444058 F12P00748 615 aaPredicted RBP16.31■□□□□ 0.2
ATPAF2-201ENST00000444058 QDPRP09417 244 aa16.31■□□□□ 0.2
ATPAF2-201ENST00000444058 CSF3P09919 207 aa16.31■□□□□ 0.2
ATPAF2-201ENST00000444058 CD79AP11912 226 aa16.31■□□□□ 0.2
ATPAF2-201ENST00000444058 NR2C1P13056 603 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms