RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ARMC4Q5T2S8 1044 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 WDFY1Q8IWB7 410 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 OR13C2Q8NGS9 318 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 OR51A7Q8NH64 312 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 FNDC8Q8TC99 324 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 LRMDAQ9H2I8 198 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 NELFAQ9H3P2 528 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 MGAT4BQ9UQ53 548 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 LYVE1Q9Y5Y7 322 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 ANKRD17O75179 2603 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 NOTCH2Q04721 2471 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 CADP27708 2225 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 DHRS12A0PJE2 317 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 DPRXA6NFQ7 191 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 MGRN1O60291 552 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 OR10H3O60404 316 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 ENTPD5O75356 428 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 CD3EP07766 207 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 PTAFRP25105 342 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 ZNF133P52736 654 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 CLRN1P58418 232 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 CTXN1P60606 82 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 UBE2NP61088 152 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 RPL27P61353 136 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 C3orf36Q3SXR2 165 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 OR2T5Q6IEZ7 315 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 ADAM5Q6NVV9 412 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 C1orf94Q6P1W5 598 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 TMEM108Q6UXF1 575 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 ZER1Q7Z7L7 766 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 ADGRG5Q8IZF4 528 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 FAM169BQ8N8A8 192 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 NOXO1Q8NFA2 376 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 OR2T29Q8NH02 315 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 ZNF837Q96EG3 531 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 RADILQ96JH8 1075 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 NPAP1Q9NZP6 1156 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 SLC7A8Q9UHI5 535 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 ST6GALNAC2Q9UJ37 374 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 POFUT2Q9Y2G5 429 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 RNF115Q9Y4L5 304 aa13.16□□□□□ -0.3
CSNK1E-210ENST00000442216 TCRBV3S1A0A5B6 114 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 UNC119BA6NIH7 251 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 A6NIZ1 184 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 TNFRSF11BO00300 401 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 TRMUO75648 421 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 NDUFB2O95178 105 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 CD14P08571 375 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 FPR3P25089 353 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 RAP1BP61224 184 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 RAP1AP62834 184 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 BSPH1Q075Z2 132 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 NRN1LQ496H8 165 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 HIKESHIQ53FT3 197 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 ALKBH2Q6NS38 261 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 LRFN4Q6PJG9 635 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 PAMR1Q6UXH9 720 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 ZNF704Q6ZNC4 412 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 MEX3DQ86XN8 651 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 GNPDA2Q8TDQ7 276 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 CANT1Q8WVQ1 401 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 RSRC1Q96IZ7 334 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 FOXB1Q99853 325 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 ALG12Q9BV10 488 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 CHID1Q9BWS9 393 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 YY1AP1Q9H869 796 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 REEP1Q9H902 201 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 SMURF2Q9HAU4 748 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 HRNRQ86YZ3 2850 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 PDZD2O15018 2839 aa13.15□□□□□ -0.3
CSNK1E-210ENST00000442216 SPG11Q96JI7 2443 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 A0A096LPE4 126 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 A0A1W2PPZ6 126 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 A0A1W2PR80 420 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 DHHO43323 396 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 AHCYL1O43865 530 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 RAF1P04049 648 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 QDPRP09417 244 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 CD40P25942 277 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 RPL4P36578 427 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 ACVR1BP36896 505 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 GSSP48637 474 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 RUNX1T1Q06455 604 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 TSPAN31Q12999 210 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 THEM4Q5T1C6 240 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 C10orf128Q5T292 105 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF813Q6ZN06 617 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 C20orf204Q6ZNR8 217 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 CCDC121Q6ZUS5 278 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 SPATA24Q86W54 205 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 ARIH2OSQ8N7S6 290 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 PAPD5Q8NDF8 572 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 OR4C15Q8NGM1 316 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms