RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 HNRNPA0Q13151 305 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 CDK5R1Q15078 307 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 ZNF239Q16600 458 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 RGS21Q2M5E4 152 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 KRT77Q7Z794 578 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 CDC20BQ86Y33 519 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 BEST3Q8N1M1 668 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 EXD3Q8N9H8 876 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 ZNF485Q8NCK3 441 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 THEM6Q8WUY1 208 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 NSMAFQ92636 917 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 MIB2Q96AX9 1013 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 KCTD12Q96CX2 325 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 MARCH7Q9H992 704 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 ZFP64Q9NPA5 681 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 FANCFQ9NPI8 374 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 B3GAT2Q9NPZ5 323 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 AKIP1Q9NQ31 210 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 LRFN1Q9P244 771 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 FBXL2Q9UKC9 423 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 CMAHPQ9Y471 501 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 TVP23AA6NH52 213 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 H7C1C5 153 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SLC19A2O60779 497 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 AKR7A3O95154 331 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 TFP02787 698 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 IMPDH2P12268 514 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 CD46P15529 392 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 RIDAP52758 137 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 BIDP55957 195 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 LCN6P62502 163 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 PLGLB1Q02325 96 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 RASGEF1BQ0VAM2 473 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 DCAF10Q5QP82 559 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 THEM4Q5T1C6 240 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 LINC01590Q5TEZ4 76 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 CEACAM19Q7Z692 300 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 ZBTB46Q86UZ6 589 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 WDSUB1Q8N9V3 476 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 TEX19Q8NA77 164 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 ZNF511Q8NB15 262 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SLC25A46Q96AG3 418 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 INTS12Q96CB8 462 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 SMIM19Q96E16 107 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 CDADC1Q9BWV3 514 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 HDHD5Q9BXW7 423 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SH2D2AQ9NP31 389 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 KLHL9Q9P2J3 617 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SF3B6Q9Y3B4 125 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 LOC101059948A0A1B0GTJ6 334 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 LOC102725191A0A1B0GVB3 256 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 SPAARA0A1B0GVQ0 90 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ISPDA4D126 451 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 CD8B2A6NJW9 211 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 AQP7P3A6NL99 342 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 C17orf51A8MQB3 221 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 FAM171A2A8MVW0 826 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ZNF254O75437 659 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 TRAPPC6AO75865 159 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 APOA1P02647 267 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 CD8BP10966 210 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 LIPCP11150 499 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 GDF1P27539 372 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 TALDO1P37837 337 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 CLDN6P56747 220 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ADAM8P78325 824 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 FABP5Q01469 135 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 MXD1Q05195 221 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 MELKQ14680 651 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 DMKNQ6E0U4 476 aaPredicted RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 KLHL24Q6TFL4 600 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 TRILQ7L0X0 811 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 MDGA2Q7Z553 956 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 TIGD4Q8IY51 512 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 OR6N1Q8NGY5 312 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 OR2AJ1Q8NGZ0 328 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ABHD4Q8TB40 342 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ARL5BQ96KC2 179 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 TM9SF2Q99805 663 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 KCNS3Q9BQ31 491 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 KLHDC3Q9BQ90 382 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 SLC30A2Q9BRI3 323 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 MROQ9BYG7 248 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 OR2B2Q9GZK3 357 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 TMEM185BQ9H7F4 350 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ISG20L2Q9H9L3 353 aaKnown RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 ZNF281Q9Y2X9 895 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 NCOR1O75376 2440 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 OR2M5A3KFT3 312 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 MS4A18H0YCH9 400 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 KLRC4-KLRK1H3BQV0 150 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ACOT7O00154 380 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 HRGP04196 525 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 INHBBP09529 407 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 CEACAM1P13688 526 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 POU3F2P20265 443 aaPredicted RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 RPS19P39019 145 aaKnown RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 CD79BP40259 229 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 DNASE1L1P49184 302 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms