RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TEX45Q8NA69 505 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 B3GNT7Q8NFL0 401 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 KBTBD8Q8NFY9 601 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR4K5Q8NGD3 323 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR4K14Q8NGD5 310 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR8H1Q8NGG4 311 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR6T1Q8NGN1 323 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR8J1Q8NGP2 316 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR9A2Q8NGT5 310 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR52P1PQ8NH57 321 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 CCL4L1Q8NHW4 92 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 MCFD2Q8NI22 146 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 WDR36Q8NI36 951 aaKnown RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 FLVCR1-AS1Q8TAF5 88 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC7A13Q8TCU3 470 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 DYNC2LI1Q8TCX1 351 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 CHPT1Q8WUD6 406 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMED6Q8WW62 240 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 CORO2AQ92828 525 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RPL3LQ92901 407 aaKnown RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 GIMAP5Q96F15 307 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SMIM10Q96HG1 83 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ADGRG7Q96K78 797 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 C10orf90Q96M02 699 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRRC1Q96M27 445 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF681Q96N22 645 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR2A5Q96R48 311 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR7D2Q96RA2 312 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 IL4I1Q96RQ9 567 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ARHGDIGQ99819 225 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 WFDC6Q9BQY6 131 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC25A33Q9BSK2 321 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RSPO3Q9BXY4 272 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 GSDMCQ9BYG8 508 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RACGAP1Q9H0H5 632 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 DCSTAMPQ9H295 470 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 MMP27Q9H306 513 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ANKRD19PQ9H560 264 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 MTHFD2LQ9H903 347 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 CACYBPQ9HB71 228 aaKnown RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC25A19Q9HC21 320 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 FBXO8Q9NRD0 319 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 HAO2Q9NYQ3 351 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ERGIC3Q9Y282 383 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 CA5BQ9Y2D0 317 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 IFT52Q9Y366 437 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 KLK4Q9Y5K2 254 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 KCNE3Q9Y6H6 103 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SPACA6W5XKT8 324 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 MYOFQ9NZM1 2061 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A075B6Q4 140 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A087WUU8 490 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A0G2JNG1 304 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A0J9YY10 115 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 LOC100506127A0A0U1RQW1 187 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 A4D1N5 150 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR6C76A6NM76 312 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CPSF4LA6NMK7 179 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRAMEF26H0Y7S4 382 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 H0YGG7 62 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 H3BQ06 376 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 M0R129 80 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CCRL2O00421 344 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 VCYO14598 125 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MAGEB3O15480 346 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 BUB3O43684 328 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TLX2O43763 284 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 KIAA0513O60268 411 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 FCMRO60667 390 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TPST2O60704 377 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CTSVO60911 334 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SULT1C4O75897 302 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR5F1O95221 314 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SOX14O95416 240 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SEMA4FO95754 770 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 GPR75O95800 540 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PTHP01270 115 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 IFI6P09912 130 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ALOX5P09917 674 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 HSMCR30P0CW71 290 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DBTP11182 482 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CTSEP14091 401 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CPMP14384 443 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 GABRG2P18507 467 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MMP11P24347 488 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CD40LGP29965 261 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 S100A5P33763 92 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SOX6P35712 828 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TGFBR1P36897 503 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SMSP52788 366 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PDX1P52945 283 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 RGS8P57771 180 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 BPIFB3P59826 476 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CDK5Q00535 292 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SORDQ00796 357 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 FAM27E3Q08E93 113 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 FUT5Q11128 374 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TSPAN31Q12999 210 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 KIR2DS5Q14953 304 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms