RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZNF793Q6ZN11 406 aa14.49□□□□□ -0.09
DHFR-201ENST00000439211 NDUFAF7Q7L592 441 aa14.49□□□□□ -0.09
DHFR-201ENST00000439211 OR52E1Q8NGJ3 308 aa14.49□□□□□ -0.09
DHFR-201ENST00000439211 SLC25A18Q9H1K4 315 aa14.49□□□□□ -0.09
DHFR-201ENST00000439211 CRLF2Q9HC73 371 aa14.49□□□□□ -0.09
DHFR-201ENST00000439211 UPB1Q9UBR1 384 aa14.49□□□□□ -0.09
DHFR-201ENST00000439211 SPTBP11277 2137 aa14.49□□□□□ -0.09
DHFR-201ENST00000439211 RFPL4AA6NLU0 287 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 RFPL4AL1F8VTS6 287 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 H3BSH0 61 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 H2AFB1P0C5Y9 115 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 NME2P22392 152 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 PDGFRLQ15198 375 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 PGGHGQ32M88 737 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 MUC20Q8N307 709 aaPredicted RBP14.48□□□□□ -0.09
DHFR-201ENST00000439211 HHIPL1Q96JK4 782 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 CCDC3Q9BQI4 270 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 SRMSQ9H3Y6 488 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 MBNL1Q9NR56 388 aaKnown RBP14.48□□□□□ -0.09
DHFR-201ENST00000439211 PPP1R14DQ9NXH3 145 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 MBTPS2O43462 519 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 SOX15O60248 233 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 ZNF25P17030 456 aaPredicted RBP14.48□□□□□ -0.09
DHFR-201ENST00000439211 PDX1P52945 283 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 TMEM35AQ53FP2 167 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 MOB3CQ70IA8 216 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 COMTD1Q86VU5 262 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 TMEFF1Q8IYR6 380 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 OR51Q1Q8NH59 317 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 EXOSC3Q9NQT5 275 aaKnown RBP14.48□□□□□ -0.09
DHFR-201ENST00000439211 PCDHGA5Q9Y5G8 931 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 MKI67P46013 3256 aaKnown RBP14.48□□□□□ -0.09
DHFR-201ENST00000439211 PRAMEF27A3QJZ7 478 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 CCR4P51679 360 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 PCBP4P57723 403 aaKnown RBP14.48□□□□□ -0.09
DHFR-201ENST00000439211 METRNLQ641Q3 311 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 OR2L5Q8NG80 312 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 OR2G2Q8NGZ5 317 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 USP36Q9P275 1121 aaKnown RBP14.48□□□□□ -0.09
DHFR-201ENST00000439211 ACAD8Q9UKU7 415 aa14.48□□□□□ -0.09
DHFR-201ENST00000439211 GABARAPH6UMI1 98 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 ACOT7O00154 380 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 SFTA3P0C7M3 94 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 RAB6AP20340 208 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 MAPK3P27361 379 aaPredicted RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 ADH7P40394 386 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 ERV3-1Q14264 604 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 CD200R1LQ6Q8B3 271 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 ENPP7Q6UWV6 458 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 NR2C2APQ86WQ0 139 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 ETFBKMTQ8IXQ9 262 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR6K6Q8NGW6 343 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 ATG101Q9BSB4 218 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 SEC11CQ9BY50 192 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR52D1Q9H346 318 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 TMEM27Q9HBJ8 222 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 HINT3Q9NQE9 182 aaKnown RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 CACNA1IQ9P0X4 2223 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 BCL2L11O43521 198 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 HYAL3O43820 417 aaPredicted RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 CD34P28906 385 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 NAA10P41227 235 aaPredicted RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 ACTR1BP42025 376 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 NUBP1P53384 320 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 MAPK14Q16539 360 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 LINC01555Q8NAE3 123 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 TMEM106CQ9BVX2 250 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 ACTRT3Q9BYD9 372 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 RHOFQ9HBH0 211 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 PPP1R2P9O14990 202 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 MED6O75586 246 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 NKX6-1P78426 367 aaPredicted RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 SURF2Q15527 256 aaPredicted RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 RPE65Q16518 533 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 RNLSQ5VYX0 342 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 ETV3LQ6ZN32 361 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 RNF44Q7L0R7 432 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 SYNPRQ8TBG9 265 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 GHSRQ92847 366 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 HIST1H2BAQ96A08 127 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 AKR1E2Q96JD6 320 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 EIF5A2Q9GZV4 153 aaKnown RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 UCK1Q9HA47 277 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 GTF2A1LQ9UNN4 478 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 NPFFR2Q9Y5X5 522 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR2M5A3KFT3 312 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 UNC119BA6NIH7 251 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 MAN2B1O00754 1011 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR2F2O95006 317 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR2A4O95047 310 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OPRD1P41143 372 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 SKP1P63208 163 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 SMAD4Q13485 552 aaKnown RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR2F1Q13607 317 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR8G1Q15617 311 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR4K14Q8NGD5 310 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 OR2A7Q96R45 310 aa14.47□□□□□ -0.09
DHFR-201ENST00000439211 FARSAQ9Y285 508 aaKnown RBP14.47□□□□□ -0.09
DHFR-201ENST00000439211 SCN2AQ99250 2005 aa14.46□□□□□ -0.09
DHFR-201ENST00000439211 ARG1P05089 322 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms