RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ZNF566Q969W8 418 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 DOK1Q99704 481 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 ECSITQ9BQ95 431 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 TMEM120AQ9BXJ8 343 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 SLC19A3Q9BZV2 496 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 BPESC1Q9GZL8 116 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 GLTPQ9NZD2 209 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 ZNF229Q9UJW7 825 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 ANK3Q12955 4377 aaKnown RBP15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 IGHV4-61A0A0C4DH41 118 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 ADRA2AP08913 450 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 ZNF14P17017 642 aaPredicted RBP15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 HNF1AP20823 631 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 GIPRP48546 466 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 RPS23P62266 143 aaKnown RBP15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 ZP4Q12836 540 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 NANOGP8Q6NSW7 305 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 NHLRC1Q6VVB1 395 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 PIWIL3Q7Z3Z3 882 aaKnown RBP15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 CDK20Q8IZL9 346 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 ZCCHC24Q8N2G6 241 aaKnown RBP15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 OR4D11Q8NGI4 311 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 NANOGQ9H9S0 305 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 SH3GLB1Q9Y371 365 aa15.94■□□□□ 0.14
AC004540.1-201ENST00000439120 FARS2O95363 451 aaKnown RBP15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 STAMBPO95630 424 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 THY1P04216 161 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 ZNF23P17027 643 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 TAS2R41P59536 307 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 MELKQ14680 651 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 CCDC80Q76M96 950 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 WDFY1Q8IWB7 410 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 LRRC17Q8N6Y2 441 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 TMEM158Q8WZ71 300 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 TMEM54Q969K7 222 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 MSI2Q96DH6 328 aaKnown RBP15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 SLC25A44Q96H78 314 aaPredicted RBP15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 PCDHAC1Q9H158 963 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 TAS2R5Q9NYW4 299 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 BAG5Q9UL15 447 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 FBN1P35555 2871 aaKnown RBP15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 DNHD1Q96M86 4753 aa15.93■□□□□ 0.14
AC004540.1-201ENST00000439120 A0A1W2PRG6 482 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 TMEM129A0AVI4 362 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 MCIDASD6RGH6 385 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 BLOC1S5-TXNDC5H3BN57 136 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 M0R233 179 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 FBP2O00757 339 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 SYNGR3O43761 229 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 LYPD3O95274 346 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 BCL10O95999 233 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 IFNA14P01570 189 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 OR8G3PP0DMU2 310 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 H2AFXP16104 143 aaPredicted RBP15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 CLRN1P58418 232 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 RAB39AQ14964 217 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 MAPRE2Q15555 327 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 RABL3Q5HYI8 236 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 DEF8Q6ZN54 512 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 CARM1Q86X55 608 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 SLC22A24Q8N4F4 322 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 OR8J3Q8NGG0 315 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 UBASH3BQ8TF42 649 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 MRPL24Q96A35 216 aaKnown RBP15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 LRRC58Q96CX6 371 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 REPIN1Q9BWE0 567 aaKnown RBP15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 MRPL37Q9BZE1 423 aaKnown RBP15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 TPK1Q9H3S4 243 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 RTTNQ86VV8 2226 aa15.92■□□□□ 0.14
AC004540.1-201ENST00000439120 BBIP1A8MTZ0 92 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 MRASO14807 208 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 TGFAP01135 160 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 NPPAP01160 153 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 IGHG1P01857 330 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 ASAH2BP0C7U1 165 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 ZNF35P13682 527 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 SRD5A1P18405 259 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 GIFP27352 417 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 GLRXP35754 106 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 EVX1P49640 407 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 GZMMP51124 257 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 CHN2P52757 468 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 ARFIP2P53365 341 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 ERICH5Q6P6B1 374 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 HDDC2Q7Z4H3 204 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 TSPYL5Q86VY4 417 aaPredicted RBP15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 SKA3Q8IX90 412 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 ARIH2OSQ8N7S6 290 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 SYT3Q9BQG1 590 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 ZNF426Q9BUY5 554 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 POLR2J2Q9GZM3 115 aaKnown RBP15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 POLR2J3Q9H1A7 115 aaKnown RBP15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 MS4A5Q9H3V2 200 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 RNF121Q9H920 327 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 ZNF224Q9NZL3 707 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 REV1Q9UBZ9 1251 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 SLC7A8Q9UHI5 535 aa15.91■□□□□ 0.14
AC004540.1-201ENST00000439120 ATRQ13535 2644 aa15.9■□□□□ 0.14
AC004540.1-201ENST00000439120 PHF1O43189 567 aaPredicted RBP15.9■□□□□ 0.14
AC004540.1-201ENST00000439120 DHHO43323 396 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms