RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 OR2L5Q8NG80 312 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 OR4E2Q8NGC2 313 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 OR5AK2Q8NH90 309 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SFXN5Q8TD22 340 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ADAD1Q96M93 576 aaKnown RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SLC19A3Q9BZV2 496 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 FAM117AQ9C073 453 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 MBNL1Q9NR56 388 aaKnown RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 MBD2Q9UBB5 411 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 A0A1W2PPE3 182 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 GGT3PA6NGU5 568 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 PRRT4C9JH25 899 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 UBBP0CG47 229 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 UBCP0CG48 685 aaKnown RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 CD53P19397 219 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ITGB8P26012 769 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ADH6P28332 368 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 CENPAP49450 140 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ACTA2P62736 377 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 RPS27AP62979 156 aaKnown RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 UBA52P62987 128 aaKnown RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SKP1P63208 163 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ACTG2P63267 376 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 DHRS2Q13268 280 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 FHL1Q13642 323 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 RAB33AQ14088 237 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 EIF2B1Q14232 305 aaKnown RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 PRAMEF17Q5VTA0 474 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 POMZP3Q6PJE2 187 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SLC35D2Q76EJ3 337 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 KRT77Q7Z794 578 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 RTN4RL2Q86UN3 420 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TCEAL8Q8IYN2 117 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 LRRC25Q8N386 305 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SMARCD2Q92925 531 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 COMMD9Q9P000 198 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 CGGBP1Q9UFW8 167 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SEC16AO15027 2179 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 RAB19A4D1S5 217 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 OR14I1A6ND48 311 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ELOA3DA6NLF2 546 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 CTAG2O75638 210 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ADRB3P13945 408 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SLC6A6P31641 620 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 CCKBRP32239 447 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 FAUP35544 74 aaKnown RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 RFC3P40938 356 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ELOA3BQ3SY89 546 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ELOA3Q8NG57 546 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 OR5T2Q8NGG2 359 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 PHOSPHO1Q8TCT1 267 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 GLYATL2Q8WU03 294 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ISOC2Q96AB3 205 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 MOAP1Q96BY2 351 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 C10orf90Q96M02 699 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 ELF4Q99607 663 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-204ENST00000438964 TMEM27Q9HBJ8 222 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 GSN-AS1Q9NRJ2 163 aa12.19□□□□□ -0.46
ACTN1-204ENST00000438964 SDK1Q7Z5N4 2213 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 RAB3DO95716 219 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 AKAIN1P0CW23 69 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 DAOP14920 347 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 PGAM2P15259 253 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 CD34P28906 385 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 PNLIPRP2P54317 469 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 MYO9BQ13459 2157 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 FCRL6Q6DN72 434 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 FOXRED2Q8IWF2 684 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 SPAG16Q8N0X2 631 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 GTPBP8Q8N3Z3 284 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-204ENST00000438964 OR52E1Q8NGJ3 308 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 OR6N1Q8NGY5 312 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 TSEN15Q8WW01 171 aaKnown RBP12.18□□□□□ -0.46
ACTN1-204ENST00000438964 RNF166Q96A37 237 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-204ENST00000438964 C20orf24Q9BUV8 137 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 ZNF629Q9UEG4 869 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-204ENST00000438964 F5P12259 2224 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 PLGP00747 810 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-204ENST00000438964 CT62P0C5K7 136 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 NID1P14543 1247 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 AKR1C4P17516 323 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 OR52W1Q6IF63 320 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 TMPRSS11FQ6ZWK6 438 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 TMEM52Q8NDY8 209 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 OR4K14Q8NGD5 310 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 SLC22A8Q8TCC7 542 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 SP7Q8TDD2 431 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-204ENST00000438964 ELP5Q8TE02 316 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 CMBLQ96DG6 245 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 AMELYQ99218 206 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 WDR76Q9H967 626 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 STARD5Q9NSY2 213 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 SLC22A13Q9Y226 551 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 MRPS2Q9Y399 296 aaKnown RBP12.18□□□□□ -0.46
ACTN1-204ENST00000438964 INSL6Q9Y581 213 aa12.18□□□□□ -0.46
ACTN1-204ENST00000438964 SPAG17Q6Q759 2223 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 DCDC2BA2VCK2 349 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 DDX6P26196 483 aaKnown RBP eCLIP12.17□□□□□ -0.46
ACTN1-204ENST00000438964 PRSS3P35030 304 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms