RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CDC40O60508 579 aaKnown RBP eCLIP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 NEMFO60524 1076 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 PEX11AO75192 247 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 IDH1O75874 414 aaKnown RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CIAO1O76071 339 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 ERLIN2O94905 339 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLITRK3O94933 977 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 OXTP01178 125 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 HSPB1P04792 205 aaKnown RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 KRT8P05787 483 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 SBK2P0C263 348 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CT45A8P0DMV1 189 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CT45A9P0DMV2 189 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CPA3P15088 417 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 VCLP18206 1134 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 MMP11P24347 488 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 PBLDP30039 288 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 STIP1P31948 543 aaKnown RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 DEKP35659 375 aaKnown RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 ASMTP46597 345 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 TRPC1P48995 793 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CAMLGP49069 296 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 ARHGDIAP52565 204 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 LINC00315P59091 139 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 KIAA1024LP59773 190 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 RPL27P61353 136 aaKnown RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 HSPA14Q0VDF9 509 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 EBI3Q14213 229 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 RCN2Q14257 317 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 GAMTQ14353 236 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 RPS6KA1Q15418 735 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 NRF1Q16656 503 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 QRICH1Q2TAL8 776 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 FBXL19-AS1Q494R0 122 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC39A12Q504Y0 691 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 HSP90AA5PQ58FG0 334 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CT45A2Q5DJT8 189 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 TPRG1LQ5T0D9 272 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 RIPPLY2Q5TAB7 128 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 LGALS9CQ6DKI2 356 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 NEK5Q6P3R8 708 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 C16orf87Q6PH81 154 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 RBM43Q6ZSC3 357 aaKnown RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 MIER3Q7Z3K6 550 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 EGFL6Q8IUX8 553 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 SBSPONQ8IVN8 264 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 LYPD1Q8N2G4 141 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 GVQW1Q8N7I0 195 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 LPCAT1Q8NF37 534 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 C10orf105Q8TEF2 133 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF75CPQ92670 426 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 GGHQ92820 318 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 PIWIL1Q96J94 861 aaKnown RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 KIR2DL4Q99706 377 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 FAM213AQ9BRX8 229 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 TCHPQ9BT92 498 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 KRT23Q9C075 422 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC5A7Q9GZV3 580 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 WWP1Q9H0M0 922 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 VPS37BQ9H9H4 285 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 MAGEF1Q9HAY2 307 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CNIH4Q9P003 139 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 EIF3KQ9UBQ5 218 aaKnown RBP1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CIDEBQ9UHD4 219 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 FBXW2Q9UKT8 454 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 HPCAL4Q9UM19 191 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 STX8Q9UNK0 236 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 PLA2G4CQ9UP65 541 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 EXOC7Q9UPT5 735 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 SMC3Q9UQE7 1217 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 ETV7Q9Y603 341 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCDC88CQ9P219 2028 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 IGHV1OR21-1A0A087WYE8 117 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 TRBV2A0A0J9YWF9 115 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 GOLGA6L4A6NEF3 574 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 B4DXG7 233 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 GPR89AB7ZAQ6 455 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 EEF1E1-BLOC1S5C9J1V9 151 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CHUKO15111 745 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ARPC1BO15143 372 aaKnown RBP1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 EEF1E1O43324 174 aaKnown RBP1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 EMC8O43402 210 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 SYT7O43581 403 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ERLIN1O75477 346 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CLPXO76031 633 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 SMR3BP02814 79 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 SNRPCP09234 159 aaKnown RBP1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 GPR89BP0CG08 455 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 TPBGLP0DKB5 382 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 MBL2P11226 248 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF18P17022 549 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF30P17039 623 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCNCP24863 283 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 RPA1P27694 616 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 NUMBP49757 651 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 SULT1E1P49888 294 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 EFNA3P52797 238 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 GBX2P52951 348 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 MFAP2P55001 183 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 SH3BGRP55822 239 aaPredicted RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms