RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ARMC8Q8IUR7 673 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 CDK20Q8IZL9 346 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 TMEM123Q8N131 208 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 ZNF786Q8N393 782 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 RFLNBQ8N5W9 214 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 LSMEM1Q8N8F7 131 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 SCAIQ8N9R8 606 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 BHLHE22Q8NFJ8 381 aaPredicted RBP6.71□□□□□ -1.34
VPS50-204ENST00000438395 GTF2H4Q92759 462 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 TAAR8Q969N4 342 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 MAELQ96JY0 434 aaKnown RBP6.71□□□□□ -1.34
VPS50-204ENST00000438395 OR52B2Q96RD2 323 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 TPK1Q9H3S4 243 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 MS4A5Q9H3V2 200 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 DENND2DQ9H6A0 471 aaPredicted RBP6.71□□□□□ -1.34
VPS50-204ENST00000438395 SEC61A2Q9H9S3 476 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 B3GAT1Q9P2W7 334 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 REV1Q9UBZ9 1251 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 SEC14L4Q9UDX3 406 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 TMEFF2Q9UIK5 374 aaPredicted RBP6.71□□□□□ -1.34
VPS50-204ENST00000438395 GPR160Q9UJ42 338 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 ZNF346Q9UL40 294 aaKnown RBP6.71□□□□□ -1.34
VPS50-204ENST00000438395 USH1CQ9Y6N9 552 aa6.71□□□□□ -1.34
VPS50-204ENST00000438395 HEATR1Q9H583 2144 aaKnown RBP6.7□□□□□ -1.34
VPS50-204ENST00000438395 LOC102725191A0A1B0GVB3 256 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 B4DSR2 109 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 UBL3O95164 117 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 FARS2O95363 451 aaKnown RBP6.7□□□□□ -1.34
VPS50-204ENST00000438395 MT-ND5P03915 603 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 NR4A1P22736 598 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 HTR2AP28223 471 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 GPR6P46095 362 aaPredicted RBP6.7□□□□□ -1.34
VPS50-204ENST00000438395 GIPRP48546 466 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 SLC18A1P54219 525 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 CDH15P55291 814 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 EGR4Q05215 589 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 PIGFQ07326 219 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 CYP51A1Q16850 503 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 GLIPR1L2Q4G1C9 344 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 TNFAIP8L3Q5GJ75 292 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 C20orf196Q8IYI0 205 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 TEX29Q8N6K0 151 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 HIPK4Q8NE63 616 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 OR6S1Q8NH40 331 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 LRRC8CQ8TDW0 803 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 SNX33Q8WV41 574 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 DYDC1Q8WWB3 177 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 MRPL24Q96A35 216 aaKnown RBP6.7□□□□□ -1.34
VPS50-204ENST00000438395 SPDL1Q96EA4 605 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 LRR1Q96L50 414 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 DOK1Q99704 481 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 SYT3Q9BQG1 590 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 EMC6Q9BV81 110 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 PAIP1Q9H074 479 aaKnown RBP6.7□□□□□ -1.34
VPS50-204ENST00000438395 NELFAQ9H3P2 528 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 EVA1AQ9H8M9 152 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 MED29Q9NX70 200 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 MRPL39Q9NYK5 338 aaKnown RBP6.7□□□□□ -1.34
VPS50-204ENST00000438395 GRIP1Q9Y3R0 1128 aa6.7□□□□□ -1.34
VPS50-204ENST00000438395 ANK3Q12955 4377 aaKnown RBP6.7□□□□□ -1.34
VPS50-204ENST00000438395 IGKV1D-42A0A075B6H8 117 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 MCIDASD6RGH6 385 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 C11orf98E9PRG8 122 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 TPD52L2O43399 206 aaKnown RBP6.69□□□□□ -1.34
VPS50-204ENST00000438395 PPIHO43447 177 aaKnown RBP6.69□□□□□ -1.34
VPS50-204ENST00000438395 TGDSO95455 350 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 MT-ATP6P00846 226 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 TFP02787 698 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 HIST1H2ABP04908 130 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 TACSTD2P09758 323 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 ADORA3P0DMS8 318 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 SAGP10523 405 aaPredicted RBP6.69□□□□□ -1.34
VPS50-204ENST00000438395 UMPSP11172 480 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 ALDH3B1P43353 468 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 EVX1P49640 407 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 RAB1AP62820 205 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 SRSF2Q01130 221 aaKnown RBP6.69□□□□□ -1.34
VPS50-204ENST00000438395 PLP2Q04941 152 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 CAMK2DQ13557 499 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 OR1Q1Q15612 314 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 TMEM53Q6P2H8 277 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 TMEM154Q6P9G4 183 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 HIST3H2AQ7L7L0 130 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 MAVSQ7Z434 540 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 HDDC2Q7Z4H3 204 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 MYPOPQ86VE0 399 aaPredicted RBP6.69□□□□□ -1.34
VPS50-204ENST00000438395 ZCCHC24Q8N2G6 241 aaKnown RBP6.69□□□□□ -1.34
VPS50-204ENST00000438395 C11orf65Q8NCR3 313 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 SLC26A7Q8TE54 656 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 HIST1H2ACQ93077 130 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 FOXB1Q99853 325 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 TMEM43Q9BTV4 400 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 ZNF416Q9BWM5 594 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 LRMDAQ9H2I8 198 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 C1orf198Q9H425 327 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 RABEP2Q9H5N1 569 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 NARFLQ9H6Q4 476 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 RNF121Q9H920 327 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 CDH20Q9HBT6 801 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms