RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TXNL4BQ9NX01 149 aaKnown RBP18.96■□□□□ 0.63
PTPRF-207ENST00000436724 SSR3Q9UNL2 185 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 TVP23AA6NH52 213 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 RENP00797 406 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 P04436 131 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 OR2T7P0C7T2 308 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 CYB561P49447 251 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 MAP2K6P52564 334 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 ACTC1P68032 377 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 ACTA1P68133 377 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 FABP5Q01469 135 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 TMEM176BQ3YBM2 270 aaPredicted RBP18.96■□□□□ 0.63
PTPRF-207ENST00000436724 TP53I3Q53FA7 332 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 C22orf42Q6IC83 251 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 OR2T27Q8NH04 317 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 ZBTB8AQ96BR9 441 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 CHST11Q9NPF2 352 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 PRSS37A4D1T9 235 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 ZIC3O60481 467 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 ITGA3P26006 1051 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 GABRA5P31644 462 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 TNFSF8P32971 234 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 EIF1P41567 113 aaKnown RBP18.95■□□□□ 0.62
PTPRF-207ENST00000436724 MFSD13AQ14CX5 517 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 CRTC2Q53ET0 693 aaPredicted RBP18.95■□□□□ 0.62
PTPRF-207ENST00000436724 SPANXN2Q5MJ10 180 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 RAET1LQ5VY80 246 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 SPINK14Q6IE38 97 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 GDPD3Q7L5L3 318 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 DTX1Q86Y01 620 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 SCAIQ8N9R8 606 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 DEPPQ9NTK1 212 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 ALKBH4Q9NXW9 302 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 GRIP1Q9Y3R0 1128 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 A0A1W2PRG6 482 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 CDRT15L2A8MXV6 281 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 PTTG1O95997 202 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 MT-ND5P03915 603 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 IFNGR1P15260 489 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 ADH6P28332 368 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 RBMS1P29558 406 aaKnown RBP18.95■□□□□ 0.62
PTPRF-207ENST00000436724 RPS27P42677 84 aaKnown RBP18.95■□□□□ 0.62
PTPRF-207ENST00000436724 DSCR4P56555 118 aaPredicted RBP18.95■□□□□ 0.62
PTPRF-207ENST00000436724 POU3F1Q03052 451 aaPredicted RBP18.95■□□□□ 0.62
PTPRF-207ENST00000436724 SELENBP1Q13228 472 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.95■□□□□ 0.621e-7■□□□□ 10.8
PTPRF-207ENST00000436724 GTPBP8Q8N3Z3 284 aaPredicted RBP18.95■□□□□ 0.62
PTPRF-207ENST00000436724 ZNF248Q8NDW4 579 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 OR2T4Q8NH00 348 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 HDHD5Q9BXW7 423 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 MED29Q9NX70 200 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 CRNNQ9UBG3 495 aaPredicted RBP18.95■□□□□ 0.62
PTPRF-207ENST00000436724 DKKL1Q9UK85 242 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 CEP250Q9BV73 2442 aa18.95■□□□□ 0.62
PTPRF-207ENST00000436724 LOC110117498-PIK3R3F6TDL0 507 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 PSMD9O00233 223 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 TRIM3O75382 744 aaPredicted RBP18.94■□□□□ 0.62
PTPRF-207ENST00000436724 KLK2P20151 261 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 TOMM20Q15388 145 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 EEF1A1P5Q5VTE0 462 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 VASH1Q7L8A9 365 aaPredicted RBP18.94■□□□□ 0.62
PTPRF-207ENST00000436724 SYT14Q8NB59 555 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 ADAMTS14Q8WXS8 1223 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 TMEM41AQ96HV5 264 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 TXNDC15Q96J42 360 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 B3GNT4Q9C0J1 378 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 TRIM36Q9NQ86 728 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 NOX1Q9Y5S8 564 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 NCKAP5O14513 1909 aa18.94■□□□□ 0.62
PTPRF-207ENST00000436724 ZNF814B7Z6K7 855 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 ZNF670-ZNF695F2Z2N8 137 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 SLC30A4O14863 429 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 IGHMP01871 453 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 ZP4Q12836 540 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 ETFDHQ16134 617 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 SLC30A2Q9BRI3 323 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 TSPAN10Q9H1Z9 355 aaPredicted RBP18.93■□□□□ 0.62
PTPRF-207ENST00000436724 WDR76Q9H967 626 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 SMURF1Q9HCE7 757 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 ASCL3Q9NQ33 180 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 MOKQ9UQ07 419 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 PCDHGB7Q9Y5F8 929 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 PTPRBP23467 1997 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 A0A087WZY1 265 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 OR2M5A3KFT3 312 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 PRR32B1ATL7 298 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 DVL2O14641 736 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 CBR3O75828 277 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 RFPL3SP0C7P2 107 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 CD96P40200 585 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 OR2B6P58173 313 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 HSF1Q00613 529 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 MXD1Q05195 221 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 SRSF6Q13247 344 aaKnown RBP18.93■□□□□ 0.62
PTPRF-207ENST00000436724 TIGD4Q8IY51 512 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 LRFN1Q9P244 771 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 B3GAT1Q9P2W7 334 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 B3GALT5Q9Y2C3 310 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 KLHDC2Q9Y2U9 406 aa18.93■□□□□ 0.62
PTPRF-207ENST00000436724 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms