RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MRPL13Q9BYD1 178 aaKnown RBP20.46■□□□□ 0.87
CPSF4-204ENST00000436336 SYT4Q9H2B2 425 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 OR51V1Q9H2C8 321 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 ASF1BQ9NVP2 202 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 CLCF1Q9UBD9 225 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 PSORS1C1Q9UIG5 152 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 MED12LQ86YW9 2145 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 SPENQ96T58 3664 aaKnown RBP20.45■□□□□ 0.86
CPSF4-204ENST00000436336 SLC22A23A1A5C7 686 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 TRIM64A6NGJ6 449 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 SLC22A31A6NKX4 558 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 CENPBD1B2RD01 187 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 IGHG1P01857 330 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 CLUP10909 449 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 DBTP11182 482 aaKnown RBP20.45■□□□□ 0.86
CPSF4-204ENST00000436336 ZNF91Q05481 1191 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 LGALS3BPQ08380 585 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 TMED1Q13445 227 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 APOFQ13790 326 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 KLHL12Q53G59 568 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 PLXDC2Q6UX71 529 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 ASB6Q9NWX5 421 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 EMC3Q9P0I2 261 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 RCE1Q9Y256 329 aa20.45■□□□□ 0.86
CPSF4-204ENST00000436336 PGA4P0DJD7 388 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 PGA3P0DJD8 388 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 SPI1P17947 270 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 SLC15A1P46059 708 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 SLC35A2P78381 396 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 CAMK2DQ13557 499 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 PRR30Q53SZ7 412 aaPredicted RBP20.44■□□□□ 0.86
CPSF4-204ENST00000436336 SLC35D3Q5M8T2 416 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 NOXO1Q8NFA2 376 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 OR2T4Q8NH00 348 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 FNDC8Q8TC99 324 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 IPCEF1Q8WWN9 437 aaPredicted RBP20.44■□□□□ 0.86
CPSF4-204ENST00000436336 GGHQ92820 318 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 TRIB1Q96RU8 372 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 DUSP21Q9H596 190 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 BCO1Q9HAY6 547 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 CNOT2Q9NZN8 540 aaKnown RBP20.44■□□□□ 0.86
CPSF4-204ENST00000436336 WARS2Q9UGM6 360 aaKnown RBP20.44■□□□□ 0.86
CPSF4-204ENST00000436336 FKBP7Q9Y680 259 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 TPRP12270 2363 aaKnown RBP20.44■□□□□ 0.86
CPSF4-204ENST00000436336 TLN1Q9Y490 2541 aaKnown RBP20.44■□□□□ 0.86
CPSF4-204ENST00000436336 ZNF724A8MTY0 619 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 PTGES3LE9PB15 166 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 ZNF432O94892 652 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 TGM6O95932 706 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 GYPBP06028 91 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 MTNR1AP48039 350 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 CLRN1P58418 232 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 RPS7P62081 194 aaKnown RBP20.44■□□□□ 0.86
CPSF4-204ENST00000436336 P4HA3Q7Z4N8 544 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 MCEMP1Q8IX19 187 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 SYT14Q8NB59 555 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 TMEM45BQ96B21 275 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 OR2M2Q96R28 347 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 TEAD3Q99594 435 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 GP6Q9HCN6 339 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 FKBP14Q9NWM8 211 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 MOKQ9UQ07 419 aa20.44■□□□□ 0.86
CPSF4-204ENST00000436336 CCDC182A6NF36 153 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 EFCAB10A6NFE3 127 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 TTLL8A6PVC2 850 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 PIPP12273 146 aaPredicted RBP20.43■□□□□ 0.86
CPSF4-204ENST00000436336 GABRA1P14867 456 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 EEF1B2P24534 225 aaKnown RBP20.43■□□□□ 0.86
CPSF4-204ENST00000436336 CRABP1P29762 137 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 ST3GAL2Q16842 350 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 ZNF585AQ6P3V2 769 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 ZBTB46Q86UZ6 589 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 OR6V1Q8N148 313 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 TSSK2Q96PF2 358 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 RBP7Q96R05 134 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 RHNO1Q9BSD3 238 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 NUAK2Q9H093 628 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 SRA1Q9HD15 236 aaKnown RBP20.43■□□□□ 0.86
CPSF4-204ENST00000436336 CCNB1IP1Q9NPC3 277 aa20.43■□□□□ 0.86
CPSF4-204ENST00000436336 MRPS18AQ9NVS2 196 aaKnown RBP20.43■□□□□ 0.86
CPSF4-204ENST00000436336 PAK1IP1Q9NWT1 392 aaPredicted RBP20.43■□□□□ 0.86
CPSF4-204ENST00000436336 WDR1O75083 606 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 TPOP07202 933 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 NR2C1P13056 603 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 PTGER4P35408 488 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 ACSF3Q4G176 576 aaPredicted RBP20.42■□□□□ 0.86
CPSF4-204ENST00000436336 THEM4Q5T1C6 240 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 LCN1P1Q5VSP4 162 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 DNM1P34Q6PK57 102 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 AHSA2Q719I0 299 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 TMEM123Q8N131 208 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 FAM57AQ8TBR7 257 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 KISS1RQ969F8 398 aaPredicted RBP20.42■□□□□ 0.86
CPSF4-204ENST00000436336 ZNF775Q96BV0 537 aaPredicted RBP20.42■□□□□ 0.86
CPSF4-204ENST00000436336 RNFT2Q96EX2 444 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 DOCK7Q96N67 2140 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 CALHM2Q9HA72 323 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 HAO2Q9NYQ3 351 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 B9D1Q9UPM9 204 aa20.42■□□□□ 0.86
CPSF4-204ENST00000436336 IRGMA1A4Y4 181 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms