RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PAIP1Q9H074 479 aaKnown RBP6.7□□□□□ -1.34
VPS50-203ENST00000436177 NELFAQ9H3P2 528 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 EVA1AQ9H8M9 152 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 MED29Q9NX70 200 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 MRPL39Q9NYK5 338 aaKnown RBP6.7□□□□□ -1.34
VPS50-203ENST00000436177 GRIP1Q9Y3R0 1128 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 ANK3Q12955 4377 aaKnown RBP6.7□□□□□ -1.34
VPS50-203ENST00000436177 IGKV1D-42A0A075B6H8 117 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 MCIDASD6RGH6 385 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 C11orf98E9PRG8 122 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 TPD52L2O43399 206 aaKnown RBP6.69□□□□□ -1.34
VPS50-203ENST00000436177 PPIHO43447 177 aaKnown RBP6.69□□□□□ -1.34
VPS50-203ENST00000436177 TGDSO95455 350 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 MT-ATP6P00846 226 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 TFP02787 698 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 HIST1H2ABP04908 130 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 TACSTD2P09758 323 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 ADORA3P0DMS8 318 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 SAGP10523 405 aaPredicted RBP6.69□□□□□ -1.34
VPS50-203ENST00000436177 UMPSP11172 480 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 ALDH3B1P43353 468 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 EVX1P49640 407 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 RAB1AP62820 205 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 SRSF2Q01130 221 aaKnown RBP6.69□□□□□ -1.34
VPS50-203ENST00000436177 PLP2Q04941 152 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 CAMK2DQ13557 499 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 OR1Q1Q15612 314 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 TMEM53Q6P2H8 277 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 TMEM154Q6P9G4 183 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 HIST3H2AQ7L7L0 130 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 MAVSQ7Z434 540 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 HDDC2Q7Z4H3 204 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 MYPOPQ86VE0 399 aaPredicted RBP6.69□□□□□ -1.34
VPS50-203ENST00000436177 ZCCHC24Q8N2G6 241 aaKnown RBP6.69□□□□□ -1.34
VPS50-203ENST00000436177 C11orf65Q8NCR3 313 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 SLC26A7Q8TE54 656 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 HIST1H2ACQ93077 130 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 HSH2DQ96JZ2 352 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 FOXB1Q99853 325 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 TMEM43Q9BTV4 400 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 ZNF416Q9BWM5 594 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 LRMDAQ9H2I8 198 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 C1orf198Q9H425 327 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 RABEP2Q9H5N1 569 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 NARFLQ9H6Q4 476 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 RNF121Q9H920 327 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 CDH20Q9HBT6 801 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 CCDC167Q9P0B6 97 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 SLC7A8Q9UHI5 535 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 DUSP13Q9UII6 198 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 RAB21Q9UL25 225 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 CHST2Q9Y4C5 530 aa6.69□□□□□ -1.34
VPS50-203ENST00000436177 ARFGEF3Q5TH69 2177 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 A0A0B4J2E0 115 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 A0A1B0GX12 115 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 SLC22A23A1A5C7 686 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 ZNF503-AS2A6NEH8 195 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 PLPP3O14495 311 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 ANGPT2O15123 496 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 RNF13O43567 381 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 FMO6PO60774 539 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 FZD7O75084 574 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 HPRP00739 348 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 BGLAPP02818 100 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 OR8G3PP0DMU2 310 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 HLA-DOBP13765 273 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 TCN1P20061 433 aaPredicted RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 DRD4P21917 467 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 ACHEP22303 614 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 GLRXP35754 106 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 ZNF84P51523 738 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 DVL1P1P54792 670 aaPredicted RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 AQP5P55064 265 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 CDH12P55289 794 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 BIDP55957 195 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 KLF3P57682 345 aaPredicted RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 ACTG1P63261 375 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 RIN1Q13671 783 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 MAD2L1BPQ15013 274 aaPredicted RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 TRIP10Q15642 601 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 AGKQ53H12 422 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 LRIF1Q5T3J3 769 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 RGS7BPQ6MZT1 257 aaPredicted RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 ZNF613Q6PF04 617 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 EPGNQ6UW88 154 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 C12orf54Q6X4T0 127 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 PIWIL3Q7Z3Z3 882 aaKnown RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 NANOGNBQ7Z5D8 188 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 PXKQ7Z7A4 578 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 DPPA2Q7Z7J5 298 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 SMYD1Q8NB12 490 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 ICA1LQ8NDH6 482 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 OR5J2Q8NH18 312 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 OR51F2Q8NH61 342 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 ZNF418Q8TF45 676 aaPredicted RBP6.68□□□□□ -1.34
VPS50-203ENST00000436177 RDH5Q92781 318 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 ZNF566Q969W8 418 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 SLC41A3Q96GZ6 507 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 C7orf26Q96N11 449 aa6.68□□□□□ -1.34
VPS50-203ENST00000436177 MOGAT1Q96PD6 335 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms