RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 PHOSPHO1Q8TCT1 267 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 ATOH1Q92858 354 aaPredicted RBP9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 ELF4Q99607 663 aaPredicted RBP9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 ING1Q9UK53 422 aaPredicted RBP9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 CAMK2AQ9UQM7 478 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 NUBP2Q9Y5Y2 271 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF593O00488 134 aaPredicted RBP9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 SIX6O95475 246 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 FABP1P07148 127 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 CBR1P16152 277 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 SOX2P48431 317 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 PLA2G7Q13093 441 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 SNTB2Q13425 540 aaKnown RBP9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 GAS6Q14393 721 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 PRAMEF17Q5VTA0 474 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 TMEM88Q6PEY1 159 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 LINGO2Q7L985 606 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 SLC16A13Q7RTY0 426 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 OVCH1Q7RTY7 1134 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF595Q8IYB9 648 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 ZFP82Q8N141 532 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 STPG2Q8N412 459 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 BOLLQ8N9W6 283 aaKnown RBP9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 OR52I2Q8NH67 350 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 SMIM4Q8WVI0 70 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 PIGKQ92643 395 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 NIT2Q9NQR4 276 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 RCE1Q9Y256 329 aa9.46□□□□□ -0.89
CLSTN1-203ENST00000435891 IGHV5-51A0A0C4DH38 117 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ELOA3DA6NLF2 546 aaPredicted RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 IFITM5A6NNB3 132 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ZNF879B4DU55 563 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 GATBO75879 557 aaKnown RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 GLCEO94923 617 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ADRA2CP18825 462 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 DPP4P27487 766 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 PPM1FP49593 454 aaPredicted RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 KCNAB1Q14722 419 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ZNF74Q16587 644 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ELOA3BQ3SY89 546 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 PAN3Q58A45 887 aaKnown RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 FNDC7Q5VTL7 733 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 KIAA0895LQ68EN5 471 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ATG4DQ86TL0 474 aaPredicted RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 LRRC75AQ8NAA5 344 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ELOA3Q8NG57 546 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 OR10AC1Q8NH08 325 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 KTI12Q96EK9 354 aaPredicted RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 CXorf58Q96LI9 332 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 RBP7Q96R05 134 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 PELOQ9BRX2 385 aaKnown RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 NRSN2Q9GZP1 204 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 NXF5Q9H1B4 397 aaKnown RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 GLS2Q9UI32 602 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 MRM2Q9UI43 246 aaKnown RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 FKBP7Q9Y680 259 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 SLC22A23A1A5C7 686 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 CDC14CA4D256 554 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 KRBOX1C9JBD0 128 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 CLDN4O14493 209 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 LCN1P31025 176 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 EFNA3P52797 238 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 CTXN1P60606 82 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ODF4Q2M2E3 257 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 LIPNQ5VXI9 398 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 POMZP3Q6PJE2 187 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 EXD3Q8N9H8 876 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 UXS1Q8NBZ7 420 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 OR4D10Q8NGI6 311 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 RPS4Y2Q8TD47 263 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 GPR137Q96N19 417 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 LPAR4Q99677 370 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 NANSQ9NR45 359 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 GPR27Q9NS67 375 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 FRRS1LQ9P0K9 344 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 MRPS33Q9Y291 106 aaKnown RBP9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 ZNF281Q9Y2X9 895 aa9.46□□□□□ -0.9
CLSTN1-203ENST00000435891 TMEM131Q92545 1883 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 C17orf105B2RV13 164 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 L7N2F9 121 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 UPK3AO75631 287 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 NSA2O95478 260 aaKnown RBP9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 MPC2O95563 127 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 GUSBP08236 651 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 TMIGD3P0DMS9 266 aaPredicted RBP9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 GABRA4P48169 554 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 FNTBP49356 437 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 ZP1P60852 638 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 SKP2Q13309 424 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 C1QL3Q5VWW1 255 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 SLC43A2Q8N370 569 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 FAM71CQ8NEG0 241 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 OR11G2Q8NGC1 345 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 FOXN4Q96NZ1 517 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 WDR76Q9H967 626 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 MMP25Q9NPA2 562 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 GPR171O14626 319 aa9.45□□□□□ -0.9
CLSTN1-203ENST00000435891 H2AFB2P0C5Z0 115 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms