RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PGBD2Q6P3X8 592 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ANKRD16Q6P6B7 361 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 KLHL17Q6TDP4 642 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 C22orf34Q6ZV56 151 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ZER1Q7Z7L7 766 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 AQP11Q8NBQ7 271 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 OR10G2Q8NGC3 310 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 OR52L1Q8NGH7 329 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 OR1K1Q8NGR3 316 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 GTPBP3Q969Y2 492 aaKnown RBP13.63□□□□□ -0.23
TREX1-201ENST00000433541 PLPPR2Q96GM1 343 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 FUZQ9BT04 418 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ESRP2Q9H6T0 727 aaKnown RBP13.63□□□□□ -0.23
TREX1-201ENST00000433541 SLC17A5Q9NRA2 495 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 RASSF1Q9NS23 344 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 VNN3Q9NY84 501 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ZNF346Q9UL40 294 aaKnown RBP13.63□□□□□ -0.23
TREX1-201ENST00000433541 SIGLEC7Q9Y286 467 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ABCA4P78363 2273 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 ABCA12Q86UK0 2595 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.62□□□□□ -0.23
TREX1-201ENST00000433541 ZNF99A8MXY4 864 aaPredicted RBP13.62□□□□□ -0.23
TREX1-201ENST00000433541 M0R1B8 84 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 PDLIM1O00151 329 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 ARHGEF9O43307 516 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 DEAF1O75398 565 aaPredicted RBP13.62□□□□□ -0.23
TREX1-201ENST00000433541 CTAG2O75638 210 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 TRMUO75648 421 aaKnown RBP13.62□□□□□ -0.23
TREX1-201ENST00000433541 GOSR1O95249 250 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 QDPRP09417 244 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 TSPAN19P0C672 248 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 PGA4P0DJD7 388 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 PGA3P0DJD8 388 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 B4GALT1P15291 398 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 NOS3P29474 1203 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 SLC6A6P31641 620 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 RPS6KA3P51812 740 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 HMGA2P52926 109 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 NR1H2P55055 460 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 TSPAN31Q12999 210 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 MICAQ29983 383 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 TBRG1Q3YBR2 411 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 ZNF813Q6ZN06 617 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 SSX8Q7RTT4 187 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 WDFY1Q8IWB7 410 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 GIPC3Q8TF64 312 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 ZNF837Q96EG3 531 aaPredicted RBP13.62□□□□□ -0.23
TREX1-201ENST00000433541 MUS81Q96NY9 551 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 TSPAN32Q96QS1 320 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 IFT27Q9BW83 186 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 CCM2LQ9NUG4 571 aaPredicted RBP13.62□□□□□ -0.23
TREX1-201ENST00000433541 KIF17Q9P2E2 1029 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 DNAJB9Q9UBS3 223 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 ADAM18Q9Y3Q7 739 aa13.62□□□□□ -0.23
TREX1-201ENST00000433541 MAGED1Q9Y5V3 778 aaPredicted RBP13.62□□□□□ -0.23
TREX1-201ENST00000433541 TEX13CA0A0J9YWL9 993 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 NPIPB13A6NJU9 1138 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 NPIPB4C9JG80 1138 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 RPL36A-HNRNPH2H7BZ11 118 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 SOCS2O14508 198 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 PPP1R3DO95685 299 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 IGHMP01871 453 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 CD14P08571 375 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 CD79AP11912 226 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 GUCA1AP43080 201 aaPredicted RBP13.61□□□□□ -0.23
TREX1-201ENST00000433541 IST1P53990 364 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 TUBA1BP68363 451 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 TUBA4AP68366 448 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 RUNX1T1Q06455 604 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 CCNIQ14094 377 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 C1orf94Q6P1W5 598 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 NHLRC1Q6VVB1 395 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 TUBA1AQ71U36 451 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 JAZF1Q86VZ6 243 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 OR4C15Q8NGM1 316 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 NSMAFQ92636 917 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 Q96M85 177 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 ERMAPQ96PL5 475 aaPredicted RBP13.61□□□□□ -0.23
TREX1-201ENST00000433541 RBP7Q96R05 134 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 GPA33Q99795 319 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 FOXB1Q99853 325 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 OR52D1Q9H346 318 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 RERGLQ9H628 205 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 ZNF556Q9HAH1 456 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 TBC1D23Q9NUY8 699 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 PDP1Q9P0J1 537 aaPredicted RBP13.61□□□□□ -0.23
TREX1-201ENST00000433541 MGAT4BQ9UQ53 548 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 AP4S1Q9Y587 144 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 IER3IP1Q9Y5U9 82 aa13.61□□□□□ -0.23
TREX1-201ENST00000433541 H7C1C5 153 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 DHHO43323 396 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 ENTPD5O75356 428 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 FARS2O95363 451 aaKnown RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 GASTP01350 101 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 HRGP04196 525 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 CD3EP07766 207 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 GSTM3P21266 225 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms