RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 ADAD1Q96M93 576 aaKnown RBP13.57□□□□□ -0.24
CNOT9-205ENST00000433439 ALKBH3Q96Q83 286 aaPredicted RBP13.57□□□□□ -0.24
CNOT9-205ENST00000433439 GPX7Q96SL4 187 aaPredicted RBP13.57□□□□□ -0.24
CNOT9-205ENST00000433439 RERGLQ9H628 205 aa13.57□□□□□ -0.24
CNOT9-205ENST00000433439 USE1Q9NZ43 259 aa13.57□□□□□ -0.24
CNOT9-205ENST00000433439 PCNX1Q96RV3 2341 aa13.57□□□□□ -0.24
CNOT9-205ENST00000433439 A6NIZ1 184 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 BHLHE40O14503 412 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 MSTNO14793 375 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 ZNF432O94892 652 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 RNF224P0DH78 156 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 CD8BP10966 210 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 CDH2P19022 906 aaPredicted RBP13.56□□□□□ -0.24
CNOT9-205ENST00000433439 EPHA2P29317 976 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 SDHAP31040 664 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 POLR2IP36954 125 aaKnown RBP13.56□□□□□ -0.24
CNOT9-205ENST00000433439 RAP1BP61224 184 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 RAP1AP62834 184 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 PGGHGQ32M88 737 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 SLC25A35Q3KQZ1 300 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 MESTQ5EB52 335 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 PHYHD1Q5SRE7 291 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 SLC27A4Q6P1M0 643 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 XKRXQ6PP77 449 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 FAM122BQ7Z309 247 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 TMEM123Q8N131 208 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 PARP8Q8N3A8 854 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 NOXO1Q8NFA2 376 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 OR52E2Q8NGJ4 325 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 LILRB4Q8NHJ6 448 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 ZNF519Q8TB69 540 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 RBM24Q9BX46 236 aaKnown RBP13.56□□□□□ -0.24
CNOT9-205ENST00000433439 KCNJ16Q9NPI9 418 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 ENOPH1Q9UHY7 261 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 HIVEP3Q5T1R4 2406 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 MYO18BQ8IUG5 2567 aa13.56□□□□□ -0.24
CNOT9-205ENST00000433439 NCOA6Q14686 2063 aaPredicted RBP13.55□□□□□ -0.24
CNOT9-205ENST00000433439 NPIPB13A6NJU9 1138 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 NPIPB4C9JG80 1138 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 CASQ2O14958 399 aaPredicted RBP13.55□□□□□ -0.24
CNOT9-205ENST00000433439 SNAP29O95721 258 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 PGA4P0DJD7 388 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 PGA3P0DJD8 388 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 HIST1H1CP16403 213 aaKnown RBP13.55□□□□□ -0.24
CNOT9-205ENST00000433439 GIPRP48546 466 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 ESRRGP62508 458 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.55□□□□□ -0.24
CNOT9-205ENST00000433439 PTGES3Q15185 160 aaKnown RBP13.55□□□□□ -0.24
CNOT9-205ENST00000433439 OGFRL1Q5TC84 451 aaPredicted RBP13.55□□□□□ -0.24
CNOT9-205ENST00000433439 FBXW9Q5XUX1 488 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 FBXW10Q5XX13 1052 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 FAM205BPQ63HN1 556 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 ACSM5Q6NUN0 579 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 LEG1Q6P5S2 330 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 ZNF474Q6S9Z5 364 aaPredicted RBP13.55□□□□□ -0.24
CNOT9-205ENST00000433439 C20orf196Q8IYI0 205 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 FAM26EQ8N5C1 309 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 SDR9C7Q8NEX9 313 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 NRG4Q8WWG1 115 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 OTULINQ96BN8 352 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 TEX12Q9BXU0 123 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 ULBP2Q9BZM5 246 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 TOR3AQ9H497 397 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 B3GAT2Q9NPZ5 323 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 ASB6Q9NWX5 421 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 BAIAP2Q9UQB8 552 aa13.55□□□□□ -0.24
CNOT9-205ENST00000433439 FREM1Q5H8C1 2179 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 ALPK2Q86TB3 2170 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 A8MXE2 369 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 ZNF587BE7ETH6 402 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 IMPA2O14732 288 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 ARPC3O15145 178 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 IDH3BO43837 385 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 CLDN14O95500 239 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 SLC2A10O95528 541 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 RENP00797 406 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 QDPRP09417 244 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 APEHP13798 732 aaKnown RBP13.54□□□□□ -0.24
CNOT9-205ENST00000433439 GRK5P34947 590 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 CDKN2AP42771 156 aaKnown RBP13.54□□□□□ -0.24
CNOT9-205ENST00000433439 ASCL1P50553 236 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 FOXG1P55316 489 aaPredicted RBP13.54□□□□□ -0.24
CNOT9-205ENST00000433439 CDK5Q00535 292 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 ROR2Q01974 943 aaKnown RBP13.54□□□□□ -0.24
CNOT9-205ENST00000433439 FMODQ06828 376 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 NPRL3Q12980 569 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 TSC22D1Q15714 1073 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 BEND4Q6ZU67 534 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 PTCHD4Q6ZW05 846 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 LINGO2Q7L985 606 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 LNX2Q8N448 690 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 CYB561A3Q8NBI2 242 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 SSC4DQ8WTU2 575 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 NSMAFQ92636 917 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 TMEM54Q969K7 222 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 PLEKHA8Q96JA3 519 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 RBP7Q96R05 134 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 NMNAT3Q96T66 252 aa13.54□□□□□ -0.24
CNOT9-205ENST00000433439 VCXQ9H320 206 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms