RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 RSPO3Q9BXY4 272 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-203ENST00000432581 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
PRKDC-203ENST00000432581 SLC13A4Q9UKG4 626 aa12.76□□□□□ -0.37
PRKDC-203ENST00000432581 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 RP2O75695 350 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 NCR1O76036 304 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 PNPP00491 289 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 MT-ATP6P00846 226 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 NAT2P11245 290 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 AHCYP23526 432 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 LMO4P61968 165 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 RAB39AQ14964 217 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 MGAM2Q2M2H8 2515 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 LRIF1Q5T3J3 769 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 RGS7BPQ6MZT1 257 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-203ENST00000432581 FAHD2BQ6P2I3 314 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-203ENST00000432581 MAVSQ7Z434 540 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 RANBP3LQ86VV4 465 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-203ENST00000432581 OR5J2Q8NH18 312 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 FAM216AQ8WUB2 273 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 FAHD2AQ96GK7 314 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 MOGAT1Q96PD6 335 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 JMJD8Q96S16 334 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 FZR1Q9UM11 496 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 PCDHB10Q9UN67 800 aa12.75□□□□□ -0.37
PRKDC-203ENST00000432581 TRIM77I1YAP6 450 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 WNT9BO14905 357 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 TPST1O60507 370 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SERPINB7O75635 380 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SERPINI2O75830 405 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 OR8G3PP0DMU2 310 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SLC6A2P23975 617 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 MRPL19P49406 292 aaKnown RBP12.74□□□□□ -0.37
PRKDC-203ENST00000432581 CDH12P55289 794 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 BIDP55957 195 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 HILS1P60008 231 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 STX1BP61266 288 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 ACSM5Q6NUN0 579 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 TMEM154Q6P9G4 183 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 DPPA2Q7Z7J5 298 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 ZNF584Q8IVC4 421 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SLC22A24Q8N4F4 322 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 C3orf56Q8N813 242 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SLC30A7Q8NEW0 376 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 OR6X1Q8NH79 312 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SGMS2Q8NHU3 365 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SNX33Q8WV41 574 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 GCDHQ92947 438 aaPredicted RBP12.74□□□□□ -0.37
PRKDC-203ENST00000432581 TMEM54Q969K7 222 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 RBM4Q9BWF3 364 aaKnown RBP12.74□□□□□ -0.37
PRKDC-203ENST00000432581 PARD6BQ9BYG5 372 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 C1orf198Q9H425 327 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 TMEM38AQ9H6F2 299 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SLC52A3Q9NQ40 469 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 HINT3Q9NQE9 182 aaKnown RBP12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SLCO1C1Q9NYB5 712 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 SLC25A37Q9NYZ2 338 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 GLTPQ9NZD2 209 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 TAAR3PQ9P1P4 343 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 CORO2BQ9UQ03 480 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 GMEB1Q9Y692 573 aa12.74□□□□□ -0.37
PRKDC-203ENST00000432581 TMEM89A2RUT3 159 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 C17orf100A8MU93 164 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 LRRN3E7EW58 273 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 FMO6PO60774 539 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 OR6A2O95222 327 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 FARS2O95363 451 aaKnown RBP12.73□□□□□ -0.37
PRKDC-203ENST00000432581 ADORA3P0DMS8 318 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 EPHA1P21709 976 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 SLC18A1P54219 525 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-203ENST00000432581 TEKQ02763 1124 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 SCARB2Q14108 478 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 THSD4Q6ZMP0 1018 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 ARMC8Q8IUR7 673 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 MSRB3Q8IXL7 192 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 RAB39BQ96DA2 213 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 ZNF665Q9H7R5 613 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 G6PC2Q9NQR9 355 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 NKIRAS2Q9NYR9 191 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 NKIRAS1Q9NYS0 192 aa12.73□□□□□ -0.37
PRKDC-203ENST00000432581 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRKDC-203ENST00000432581 V9GYY5 206 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-203ENST00000432581 IGLV3-9A0A075B6K5 115 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 A0A0G2JMP0 313 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 A0A0X1KG70 313 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 C11orf98E9PRG8 122 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 TPST2O60704 377 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 PTHP01270 115 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 PATE4P0C8F1 98 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 ZNF250P15622 560 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 MAGEB1P43366 347 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 LIMS1P48059 325 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 ARFIP2P53365 341 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 RBBP4Q09028 425 aa12.72□□□□□ -0.37
PRKDC-203ENST00000432581 MOGQ16653 247 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms