RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 TALDO1P37837 337 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 POLR2HP52434 150 aaKnown RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 NR0B2Q15466 257 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 MDGA2Q7Z553 956 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 DUSP18Q8NEJ0 188 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 SPSB2Q99619 263 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 NKX3-1Q99801 234 aaPredicted RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 MRPL22Q9NWU5 206 aaKnown RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 NPAP1Q9NZP6 1156 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 ZNF221Q9UK13 617 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 MOKQ9UQ07 419 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 TNRC6BQ9UPQ9 1833 aaKnown RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 HTR3EA5X5Y0 456 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 SLC43A1O75387 559 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 OPN1LWP04000 364 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 CFIP05156 583 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 RBMS1P29558 406 aaKnown RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 RPS15P62841 145 aaKnown RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 SGCBQ16585 318 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 SLC36A2Q495M3 483 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 YOD1Q5VVQ6 348 aaPredicted RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 LRRN1Q6UXK5 716 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 NCCRP1Q6ZVX7 275 aaPredicted RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 MAMDC2Q7Z304 686 aaPredicted RBP13.22□□□□□ -0.29
RFTN1-203ENST00000432519 GRINAQ7Z429 371 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 RABEPKQ7Z6M1 372 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 SERPINA12Q8IW75 414 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 PRSS35Q8N3Z0 413 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 ZNF519Q8TB69 540 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 GAREM1Q9H706 876 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 ALG5Q9Y673 324 aa13.22□□□□□ -0.29
RFTN1-203ENST00000432519 A8MVM7 634 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 SLC16A7O60669 478 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 GATBO75879 557 aaKnown RBP13.21□□□□□ -0.29
RFTN1-203ENST00000432519 PRKAR1AP10644 381 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 ZNF28P17035 718 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 CAPZA2P47755 286 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 CENPAP49450 140 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 CD83Q01151 205 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 ACY1Q03154 408 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 HSF2Q03933 536 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 SF3A2Q15428 464 aaKnown RBP13.21□□□□□ -0.29
RFTN1-203ENST00000432519 EMC4Q5J8M3 183 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 KRT74Q7RTS7 529 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 OR8K3Q8NH51 312 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 RFT1Q96AA3 541 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 ZC3HAV1LQ96H79 300 aaKnown RBP13.21□□□□□ -0.29
RFTN1-203ENST00000432519 GFM1Q96RP9 751 aaKnown RBP13.21□□□□□ -0.29
RFTN1-203ENST00000432519 RARRES3Q9UL19 164 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 B9D1Q9UPM9 204 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 NCOR1O75376 2440 aa13.21□□□□□ -0.29
RFTN1-203ENST00000432519 TRAV8-7A0A075B6U6 113 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 PRSS37A4D1T9 235 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 HMX3A6NHT5 357 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 FTCDNL1E5RQL4 147 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 PLPP3O14495 311 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 TOX3O15405 576 aaPredicted RBP13.21□□□□□ -0.3
RFTN1-203ENST00000432519 EFNA2O43921 213 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 DXOO77932 396 aaKnown RBP13.21□□□□□ -0.3
RFTN1-203ENST00000432519 RENP00797 406 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 HLA-DQA2P01906 255 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 PTHLHP12272 177 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 LCN1P31025 176 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 INPP1P49441 399 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 EMP2P54851 167 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 DCDP81605 110 aaKnown RBP13.21□□□□□ -0.3
RFTN1-203ENST00000432519 PLA2G7Q13093 441 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 ALKBH1Q13686 389 aaKnown RBP13.21□□□□□ -0.3
RFTN1-203ENST00000432519 NUP54Q7Z3B4 507 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 HAVCR2Q8TDQ0 301 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 CAPSLQ8WWF8 208 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 YIPF5Q969M3 257 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 ZNF486Q96H40 463 aaPredicted RBP13.21□□□□□ -0.3
RFTN1-203ENST00000432519 INTS14Q96SY0 518 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 ABCG5Q9H222 651 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 AUNIPQ9H7T9 357 aa13.21□□□□□ -0.3
RFTN1-203ENST00000432519 PCDHGA9Q9Y5G4 932 aaKnown RBP13.21□□□□□ -0.3
RFTN1-203ENST00000432519 H0YC42 278 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 GPRIN2O60269 458 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 PNPP00491 289 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 RPL27P61353 136 aaKnown RBP13.2□□□□□ -0.3
RFTN1-203ENST00000432519 FMODQ06828 376 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 PHF19Q5T6S3 580 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 GPR139Q6DWJ6 353 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 OVCH1Q7RTY7 1134 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 CMTM4Q8IZR5 234 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 OR2G2Q8NGZ5 317 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 HGDQ93099 445 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 SLC25A38Q96DW6 304 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 DUSP23Q9BVJ7 150 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 TP63Q9H3D4 680 aaPredicted RBP13.2□□□□□ -0.3
RFTN1-203ENST00000432519 DDX28Q9NUL7 540 aaKnown RBP13.2□□□□□ -0.3
RFTN1-203ENST00000432519 IGKV1D-43A0A0B4J1Z2 117 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 TEX51A0A1B0GUA7 166 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 OR4C45A6NMZ5 311 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 IFITM5A6NNB3 132 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 ZNF593O00488 134 aaPredicted RBP13.2□□□□□ -0.3
RFTN1-203ENST00000432519 DOK2O60496 412 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 KRT8P05787 483 aa13.2□□□□□ -0.3
RFTN1-203ENST00000432519 CD1AP06126 327 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms